ORUFI12G01460 (Oryza rufipogon)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 ORUFI12G01460 T201048_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI12G01460.1 GRAS 292 653

Links

Other GRAS family TFs
Other Oryza rufipogon TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_14336 Aegilops tauschii F775_14336 N 0.925
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.784
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.816
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.784
SCR Arabidopsis thaliana AT3G54220 N 0.784
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.784
Bo8g083500 Brassica oleracea Bo8g083500 N 0.784
Bra007056 Brassica rapa Bra007056 N 0.789
PK22310.1 Cannabis sativa PK22310.1 N 0.821
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.784
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.784
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.809
Ca_09530 Cicer arietinum Ca_09530 N 0.795
Cla012346 Citrullus lanatus Cla012346 N 0.809
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.816
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.816
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.806
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.812
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.787
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.812
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.812
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.803
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.800
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.777
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.909
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.974
LPERR11G01220 Leersia perrieri LPERR11G01220 N 1.000
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.748
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.751
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.809
MDP0000397638 Malus domestica MDP0000397638 N 0.817
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.819
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.825
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.801
mgf012242m Mimulus guttatus mgf012242m N 0.795
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.839
OBART11G01460 Oryza barthii OBART11G01460 N 0.975
OBART12G01190 Oryza barthii OBART12G01190 N 0.990
OB07G24850 Oryza brachyantha OB07G24850 N 0.719
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N 0.987
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N 0.973
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.990
BGIOSGA036912 Oryza indica BGIOSGA036912 N 1.000
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.992
OLONG_010321 Oryza longistaminata OLONG_010321 N 1.000
OMERI06G09050 Oryza meridionalis OMERI06G09050 N 0.730
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.961
OS07G0567700 Oryza sativa OS07G0567700 N 0.719
SCR1 Oryza sativa OS11G0124300 N 0.989
SCR2 Oryza sativa OS12G0122000 N 1.000
Pavir.J21588 Panicum virgatum Pavir.J21588 N 0.916
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.917
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N 0.903
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.819
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.816
Pm002956 Prunus mume Pm002956 N 0.823
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.825
30073.m002204 Ricinus communis 30073.m002204 N 0.819
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.783
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.814
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.713
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.809
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.806
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.945
TCM_017746 Theobroma cacao TCM_017746 N 0.813
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.917
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.909
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.911
Traes_5DL_3EC609F62 Triticum aestivum Traes_5DL_3EC609F62 N 0.921
TRIUR3_28106 Triticum urartu TRIUR3_28106 N 0.955
SCR Vitis vinifera VIT_08s0056g00050 N 0.835
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.962
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.915