POPTR_0006s11500 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0006s11500 T201202_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s11500.1 GRAS 464 822

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.799
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.877
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.869
SCR Arabidopsis thaliana AT3G54220 N 0.869
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.869
Bo8g083500 Brassica oleracea Bo8g083500 N 0.872
Bra007056 Brassica rapa Bra007056 N 0.749
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.869
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.869
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.911
Ca_09530 Cicer arietinum Ca_09530 N 0.891
Cla012346 Citrullus lanatus Cla012346 N 0.891
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.928
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.928
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.889
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.886
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.875
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.903
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.894
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.897
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.900
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.872
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.788
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.815
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.819
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.811
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.903
MDP0000397638 Malus domestica MDP0000397638 N 0.905
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.936
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.925
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.891
mgf012242m Mimulus guttatus mgf012242m N 0.894
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.833
OBART11G01460 Oryza barthii OBART11G01460 N 0.799
OBART12G01190 Oryza barthii OBART12G01190 N 0.713
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.713
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.816
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.816
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.713
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.788
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.816
SCR1 Oryza sativa OS11G0124300 N 0.816
SCR2 Oryza sativa OS12G0122000 N 0.816
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.777
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.961
Pm002956 Prunus mume Pm002956 N 0.911
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.911
30073.m002204 Ricinus communis 30073.m002204 N 0.928
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.925
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.981
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.716
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.889
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.889
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.816
TCM_017746 Theobroma cacao TCM_017746 N 0.922
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.802
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.799
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.797
SCR Vitis vinifera VIT_08s0056g00050 N 0.928
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.819
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.788