cassava25218.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava25218.valid.m1 T202070_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava25218.valid.m1 GRAS 386 744

Links

Other GRAS family TFs
Other Manihot esculenta TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.805
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.900
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.903
SCR Arabidopsis thaliana AT3G54220 N 0.903
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.903
Bo8g083500 Brassica oleracea Bo8g083500 N 0.905
Bra007056 Brassica rapa Bra007056 N 0.780
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.903
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.903
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.933
Ca_09530 Cicer arietinum Ca_09530 N 0.914
Cla012346 Citrullus lanatus Cla012346 N 0.911
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.944
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.944
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.908
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.916
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.903
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.925
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.911
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.908
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.908
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.875
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.794
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.827
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.938
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.819
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.820
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.922
MDP0000397638 Malus domestica MDP0000397638 N 0.922
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.975
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.908
mgf012242m Mimulus guttatus mgf012242m N 0.905
GSMUA_Achr11G20070_001 Musa acuminata GSMUA_Achr11G20070_001 N 0.702
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.844
OBART11G01460 Oryza barthii OBART11G01460 N 0.808
OBART12G01190 Oryza barthii OBART12G01190 N 0.724
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.724
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.820
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.825
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.724
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.797
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.825
SCR1 Oryza sativa OS11G0124300 N 0.825
SCR2 Oryza sativa OS12G0122000 N 0.825
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.788
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.936
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.953
Pm002956 Prunus mume Pm002956 N 0.933
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.936
30073.m002204 Ricinus communis 30073.m002204 N 0.969
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.933
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.955
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.738
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.908
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.900
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.827
TCM_017746 Theobroma cacao TCM_017746 N 0.933
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.811
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.813
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.805
SCR Vitis vinifera VIT_08s0056g00050 N 0.936
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.830
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.797