Carubv10020171m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10020171m.g T202365_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10020171m GRAS 152 504

Links

Other GRAS family TFs
Other Capsella rubella TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N 0.889
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.709
RGL1 Arabidopsis thaliana AT1G66350 N 0.903
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N 0.932
Bo2g052880 Brassica oleracea Bo2g052880 N 0.823
Bra039762 Brassica rapa Bra039762 N 0.823
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N 0.989
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.712
Ca_13295 Cicer arietinum Ca_13295 I 0.707
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.729
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.729
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.715
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.840
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.721
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.721
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.711
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.704
MDP0000669451 Malus domestica MDP0000669451 I 0.735
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.732
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.706
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.724
Pm014329 Prunus mume Pm014329 I 0.724
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.718
28677.m000055 Ricinus communis 28677.m000055 N 0.709
29692.m000540 Ricinus communis 29692.m000540 N 0.707
TCM_010965 Theobroma cacao TCM_010965 N 0.704
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.712