CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g009376m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g009376m.g
T202933_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g009376m
GRAS
166
536
LKHVLIACAKAVSENELLLANWLMYELRQMVSVSGEPIQRLGAYMLEGLVARLNSSGSSICKSLRCKEPASSDLLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQESNTNTAAFYPRFLEALNYYTAMFESIDVNLARDHKERINIEQHCLARDVVNIIACEGPERIERHELLGKWRSRFTMAGFRPYPLSSVVNATIKTLLENYCNRYRLQERDGALFLGWMNRDLVASCAWR
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
97 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_013_00142
Aquilegia coerulea
Aquca_013_00142
I
BRADI3G09690
Brachypodium distachyon
BRADI3G09690
I
Gorai.007G025500
Gossypium raimondii
Gorai.007G025500
I
MLOC_57360
Hordeum vulgare
MLOC_57360
N
LPERR02G09420
Leersia perrieri
LPERR02G09420
N
OBART02G11160
Oryza barthii
OBART02G11160
I
OB02G19930
Oryza brachyantha
OB02G19930
N
OGLUM02G11100
Oryza glumaepatula
OGLUM02G11100
I
BGIOSGA006746
Oryza indica
BGIOSGA006746
I
OLONG_021730
Oryza longistaminata
OLONG_021730
N
OMERI02G11890
Oryza meridionalis
OMERI02G11890
N
ONIVA02G12490
Oryza nivara
ONIVA02G12490
I
OPUNC02G09900
Oryza punctata
OPUNC02G09900
I
ORUFI02G11130
Oryza rufipogon
ORUFI02G11130
I
Pavir.Ab01026
Panicum virgatum
Pavir.Ab01026
I
Pavir.J07596
Panicum virgatum
Pavir.J07596
I
Si017040m.g
Setaria italica
Si017040m.g
I
Sb04g009610
Sorghum bicolor
Sb04g009610
I
Traes_2AL_72F4E1905
Triticum aestivum
Traes_2AL_72F4E1905
I
Traes_2BL_0F18ED637
Triticum aestivum
Traes_2BL_0F18ED637
N
GRMZM2G060253
Zea mays
GRMZM2G060253
I