BRADI2G16647 (Brachypodium distachyon)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 BRADI2G16647 T205227_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.649 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G16647.1 Homeodomain 44 100

Links

Other Homeodomain family TFs
Other Brachypodium distachyon TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01844 Aegilops tauschii F775_01844 I 0.643
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.656
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.645
HB-1 Arabidopsis lyrata fgenesh2_kg.1__3015__AT1G28420.1 I 0.649
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.651
RLT1 Arabidopsis thaliana AT1G28420 D 0.649
RLT2 Arabidopsis thaliana AT5G44180 I 0.634
Bostr.15697s0165 Boechera stricta Bostr.15697s0165 I 0.650
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.651
BRADI2G46230 Brachypodium distachyon BRADI2G46230 I 0.643
Bo3g143570 Brassica oleracea Bo3g143570 I 0.652
Bo5g055970 Brassica oleracea Bo5g055970 I 0.652
Bo7g067190 Brassica oleracea Bo7g067190 I 0.638
Bra010869 Brassica rapa Bra010869 I 0.652
Bra032908 Brassica rapa Bra032908 I 0.651
Bra033725 Brassica rapa Bra033725 I 0.640
PK06068.1 Cannabis sativa PK06068.1 I 0.646
PK13272.1 Cannabis sativa PK13272.1 I 0.650
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.650
Cagra.1822s0015 Capsella grandiflora Cagra.1822s0015 I 0.649
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.650
evm.TU.supercontig_27.2 Carica papaya evm.TU.supercontig_27.2 I 0.650
evm.TU.supercontig_83.97 Carica papaya evm.TU.supercontig_83.97 I 0.634
Ca_00337 Cicer arietinum Ca_00337 I 0.650
Ca_06343 Cicer arietinum Ca_06343 I 0.650
Ca_11272 Cicer arietinum Ca_11272 I 0.651
Cla009803 Citrullus lanatus Cla009803 I 0.650
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.634
Ciclev10014023m.g Citrus clementina Ciclev10014023m.g I 0.650
orange1.1g000279m.g Citrus sinensis orange1.1g000279m.g I 0.650
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.634
Cucsa.046480 Cucumis sativus Cucsa.046480 I 0.650
Eucgr.D00596 Eucalyptus grandis Eucgr.D00596 I 0.627
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.639
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.651
Thhalv10006543m.g Eutrema salsugineum Thhalv10006543m.g I 0.650
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.646
gene29752-v1.0-hybrid Fragaria vesca gene29752-v1.0-hybrid I 0.650
GLYMA06G44290 Glycine max GLYMA06G44290 I 0.624
GLYMA07G32180 Glycine max GLYMA07G32180 I 0.650
GLYMA13G24370 Glycine max GLYMA13G24370 I 0.650
GLYMA13G30860 Glycine max GLYMA13G30860 I 0.650
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.634
Gorai.010G243500 Gossypium raimondii Gorai.010G243500 I 0.634
Gorai.010G256900 Gossypium raimondii Gorai.010G256900 I 0.634
MLOC_62571 Hordeum vulgare MLOC_62571 I 0.643
LPERR01G22320 Leersia perrieri LPERR01G22320 I 0.644
LPERR05G21380 Leersia perrieri LPERR05G21380 I 0.792
Lus10013979.g Linum usitatissimum Lus10013979.g I 0.637
Lus10015325.g Linum usitatissimum Lus10015325.g I 0.629
Lus10015400.g Linum usitatissimum Lus10015400.g I 0.649
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.634
Lus10025454.g Linum usitatissimum Lus10025454.g I 0.629
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.634
MDP0000192108 Malus domestica MDP0000192108 I 0.650
MDP0000288192 Malus domestica MDP0000288192 I 0.638
cassava1593.valid.m1 Manihot esculenta cassava1593.valid.m1 I 0.650
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.634
MTR_2g014490 Medicago truncatula MTR_2g014490 I 0.650
MTR_4g088375 Medicago truncatula MTR_4g088375 I 0.650
mgf006635m Mimulus guttatus mgf006635m I 0.634
mgf006858m Mimulus guttatus mgf006858m I 0.649
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.633
OBART05G25730 Oryza barthii OBART05G25730 I 0.792
OB01G35240 Oryza brachyantha OB01G35240 I 0.644
ORGLA05G0222200 Oryza glaberrima ORGLA05G0222200 I 0.792
OGLUM01G29920 Oryza glumaepatula OGLUM01G29920 I 0.644
OGLUM05G27370 Oryza glumaepatula OGLUM05G27370 I 0.792
BGIOSGA004179 Oryza indica BGIOSGA004179 I 0.644
BGIOSGA022450 Oryza indica BGIOSGA022450 I 0.792
OMERI01G23740 Oryza meridionalis OMERI01G23740 I 0.644
ONIVA01G29520 Oryza nivara ONIVA01G29520 I 0.644
ONIVA05G27640 Oryza nivara ONIVA05G27640 I 0.792
OPUNC01G25990 Oryza punctata OPUNC01G25990 I 0.644
ORUFI01G29060 Oryza rufipogon ORUFI01G29060 I 0.644
ORUFI05G27630 Oryza rufipogon ORUFI05G27630 I 0.792
OS01G0672201 Oryza sativa OS01G0672201 I 0.644
Pavir.Ca00923 Panicum virgatum Pavir.Ca00923 I 0.776
Pavir.J20612 Panicum virgatum Pavir.J20612 I 0.776
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.630
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.633
POPTR_0011s05660 Populus trichocarpa POPTR_0011s05660 I 0.642
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.634
Pm010098 Prunus mume Pm010098 I 0.650
PRUPE_ppa000115mg Prunus persica PRUPE_ppa000115mg I 0.650
29983.m003128 Ricinus communis 29983.m003128 I 0.634
30190.m011307 Ricinus communis 30190.m011307 I 0.616
SapurV1A.0012s0660 Salix purpurea SapurV1A.0012s0660 I 0.650
SapurV1A.0032s0540 Salix purpurea SapurV1A.0032s0540 I 0.652
SapurV1A.0118s0310 Salix purpurea SapurV1A.0118s0310 I 0.633
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.634
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.633
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.633
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.605
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.605
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.650
SELMODRAFT_447089 Selaginella moellendorffii SELMODRAFT_447089 I 0.650
Si004333m.g Setaria italica Si004333m.g I 0.644
Si020949m.g Setaria italica Si020949m.g I 0.777
Solyc02g077660.2 Solanum lycopersicum Solyc02g077660.2 I 0.628
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.646
Sb03g030770 Sorghum bicolor Sb03g030770 I 0.644
Sb03g030782 Sorghum bicolor Sb03g030782 I 0.644
TCM_008214 Theobroma cacao TCM_008214 I 0.634
TCM_029805 Theobroma cacao TCM_029805 I 0.634
VIT_10s0003g00290 Vitis vinifera VIT_10s0003g00290 I 0.656
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.646
GRMZM2G060541 Zea mays GRMZM2G060541 I 0.782
GRMZM2G122750 Zea mays GRMZM2G122750 I 0.777
GRMZM2G125294 Zea mays GRMZM2G125294 I 0.777
GRMZM2G159357 Zea mays GRMZM2G159357 I 0.644