Traes_4DS_F05E51AD8 (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_4DS_F05E51AD8 T224230_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.748 0.675
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.744 0.650
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.744 0.650
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.731 0.675
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.697 0.525
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.697 0.525
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.697 0.525
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.697 0.525
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.655 0.525
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.624 0.850
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.607 0.500
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4DS_F05E51AD8.1 Homeodomain 1 40

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

1239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.000
PK03316.1 Cannabis sativa PK03316.1 N 0.000
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.000
Ca_11038 Cicer arietinum Ca_11038 N 0.000
Cla016088 Citrullus lanatus Cla016088 N 0.000
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.000
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.000
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.000
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.000
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.000
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.000
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.000
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.000
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.000
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.000
Lus10025058.g Linum usitatissimum Lus10025058.g N 0.000
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.000
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.000
MDP0000155077 Malus domestica MDP0000155077 N 0.000
MDP0000202739 Malus domestica MDP0000202739 N 0.000
MDP0000225222 Malus domestica MDP0000225222 N 0.000
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.000
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.000
AZW_EuGene.0000110131 Micromonas pusilla AZW_EuGene.0000110131 N 0.000
mgf001526m Mimulus guttatus mgf001526m N 0.000
mgf015980m Mimulus guttatus mgf015980m I 0.000
mgf014458m Mimulus guttatus mgf014458m N 0.000
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.000
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.000
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.000
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.000
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.000
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.000
OS02G0121100 Oryza sativa OS02G0121100 N 0.000
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.000
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.000
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.000
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.000
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.000
Pm020837 Prunus mume Pm020837 I 0.000
Pm026767 Prunus mume Pm026767 N 0.000
PRUPE_ppa010531mg Prunus persica PRUPE_ppa010531mg N 0.000
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.000
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.000
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.000
Solyc01g111280.2 Solanum lycopersicum Solyc01g111280.2 N 0.000
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.000
PGSC0003DMG400001591 Solanum tuberosum PGSC0003DMG400001591 N 0.000
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.000
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.000
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.000
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.000
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.000
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.000