VDAG_04837 (Verticillium dahliae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VDAG_04837 T224476_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FGRRES_16926_M
M02133_2.00 		Fusarium graminearum
NNKACWNN
NNWGTMNN		 PBM
Weirauch et al.(2014)
pTH6267 		0.612 0.554
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY23399 Homeodomain 76 134

Links

Other Homeodomain family TFs
Other Verticillium dahliae TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_14336 Aegilops tauschii F775_14336 N
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N
SCR Arabidopsis thaliana AT3G54220 N
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N
Bo8g083500 Brassica oleracea Bo8g083500 N
Bra007056 Brassica rapa Bra007056 N
PK22310.1 Cannabis sativa PK22310.1 N
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N
Carubv10016802m.g Capsella rubella Carubv10016802m.g N
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N
Ca_09530 Cicer arietinum Ca_09530 N
Cla012346 Citrullus lanatus Cla012346 N
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N
Cucsa.002880 Cucumis sativus Cucsa.002880 N
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N
GLYMA09G40620 Glycine max GLYMA09G40620 N
GLYMA18G45220 Glycine max GLYMA18G45220 N
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N
MLOC_64716 Hordeum vulgare MLOC_64716 N
LPERR12G01340 Leersia perrieri LPERR12G01340 N
LPERR11G01220 Leersia perrieri LPERR11G01220 N
Lus10040734.g Linum usitatissimum Lus10040734.g N
Lus10016496.g Linum usitatissimum Lus10016496.g N
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N
MDP0000397638 Malus domestica MDP0000397638 N
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N
MTR_7g074650 Medicago truncatula MTR_7g074650 N
mgf012242m Mimulus guttatus mgf012242m N
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N
OBART11G01460 Oryza barthii OBART11G01460 N
OBART12G01190 Oryza barthii OBART12G01190 N
OB07G24850 Oryza brachyantha OB07G24850 N
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N
BGIOSGA036912 Oryza indica BGIOSGA036912 N
BGIOSGA034703 Oryza indica BGIOSGA034703 N
OLONG_010321 Oryza longistaminata OLONG_010321 N
OMERI06G09050 Oryza meridionalis OMERI06G09050 N
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N
OS07G0567700 Oryza sativa OS07G0567700 N
SCR1 Oryza sativa OS11G0124300 N
Pavir.J21588 Panicum virgatum Pavir.J21588 N
Pavir.J08573 Panicum virgatum Pavir.J08573 N
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N
Pm002956 Prunus mume Pm002956 N
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N
30073.m002204 Ricinus communis 30073.m002204 N
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N
Sb05g001500 Sorghum bicolor Sb05g001500 N
TCM_017746 Theobroma cacao TCM_017746 N
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N
Traes_5DL_3EC609F62 Triticum aestivum Traes_5DL_3EC609F62 N
TRIUR3_28106 Triticum urartu TRIUR3_28106 N
SCR Vitis vinifera VIT_08s0056g00050 N
GRMZM2G131516 Zea mays GRMZM2G131516 N
GRMZM2G015080 Zea mays GRMZM2G015080 N