OBART03G03820 (Oryza barthii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OBART03G03820 T245536_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.722 0.722
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.722 0.722
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G03820.1 LOB 13 103

Links

Other LOB family TFs
Other Oryza barthii TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_24151 Aegilops tauschii F775_24151 I
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I
fgenesh2_kg.1__4183__AT1G51140.1 Arabidopsis lyrata fgenesh2_kg.1__4183__AT1G51140.1 I
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I
BHLH80 Arabidopsis thaliana AT1G35460 D
BHLH122 Arabidopsis thaliana AT1G51140 D
AT2G42280 Arabidopsis thaliana AT2G42280 D
AT2G43140 Arabidopsis thaliana AT2G43140 I
BHLH81 Arabidopsis thaliana AT4G09180 I
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I
Bostr.26675s0074 Boechera stricta Bostr.26675s0074 I
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I
Bo3g036400 Brassica oleracea Bo3g036400 I
Bo4g019620 Brassica oleracea Bo4g019620 I
Bo4g191390 Brassica oleracea Bo4g191390 I
Bo6g024810 Brassica oleracea Bo6g024810 I
Bo6g043840 Brassica oleracea Bo6g043840 I
Bo8g026850 Brassica oleracea Bo8g026850 I
Bra000291 Brassica rapa Bra000291 I
Bra004748 Brassica rapa Bra004748 I
Bra016886 Brassica rapa Bra016886 I
Bra018896 Brassica rapa Bra018896 I
Bra028088 Brassica rapa Bra028088 I
Bra036760 Brassica rapa Bra036760 I
PK06301.1 Cannabis sativa PK06301.1 I
PK07850.1 Cannabis sativa PK07850.1 I
PK14093.1 Cannabis sativa PK14093.1 I
PK18038.1 Cannabis sativa PK18038.1 I
PK20089.1 Cannabis sativa PK20089.1 I
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I
Cagra.2093s0006 Capsella grandiflora Cagra.2093s0006 I
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I
Carubv10001721m.g Capsella rubella Carubv10001721m.g I
Carubv10009458m.g Capsella rubella Carubv10009458m.g I
Carubv10010050m.g Capsella rubella Carubv10010050m.g I
Carubv10023498m.g Capsella rubella Carubv10023498m.g I
Carubv10023683m.g Capsella rubella Carubv10023683m.g I
evm.TU.contig_45766 Carica papaya evm.TU.contig_45766 I
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I
Ca_02662 Cicer arietinum Ca_02662 I
Ca_14223 Cicer arietinum Ca_14223 I
Ca_26916 Cicer arietinum Ca_26916 I
Cla015469 Citrullus lanatus Cla015469 I
Cla017792 Citrullus lanatus Cla017792 I
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I
Ciclev10015437m.g Citrus clementina Ciclev10015437m.g I
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I
orange1.1g015337m.g Citrus sinensis orange1.1g015337m.g I
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I
Cucsa.050160 Cucumis sativus Cucsa.050160 I
Cucsa.061590 Cucumis sativus Cucsa.061590 I
Cucsa.242910 Cucumis sativus Cucsa.242910 I
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I
Eucgr.B03669 Eucalyptus grandis Eucgr.B03669 I
Eucgr.G03396 Eucalyptus grandis Eucgr.G03396 I
Eucgr.J00796 Eucalyptus grandis Eucgr.J00796 I
Thhalv10011463m.g Eutrema salsugineum Thhalv10011463m.g I
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I
GLYMA02G29830 Glycine max GLYMA02G29830 I
GLYMA08G16190 Glycine max GLYMA08G16190 I
GLYMA08G26110 Glycine max GLYMA08G26110 I
GLYMA10G12150 Glycine max GLYMA10G12150 I
GLYMA11G13960 Glycine max GLYMA11G13960 I
GLYMA12G05930 Glycine max GLYMA12G05930 I
GLYMA13G41670 Glycine max GLYMA13G41670 I
GLYMA15G03740 Glycine max GLYMA15G03740 I
GLYMA15G42680 Glycine max GLYMA15G42680 I
GLYMA19G32600 Glycine max GLYMA19G32600 I
GLYMA20G39220 Glycine max GLYMA20G39220 I
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I
Gorai.009G071900 Gossypium raimondii Gorai.009G071900 I
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I
MLOC_67834 Hordeum vulgare MLOC_67834 I
LPERR02G18900 Leersia perrieri LPERR02G18900 I
LPERR08G16800 Leersia perrieri LPERR08G16800 I
LPERR09G10800 Leersia perrieri LPERR09G10800 I
Lus10021023.g Linum usitatissimum Lus10021023.g I
Lus10031255.g Linum usitatissimum Lus10031255.g I
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I
MDP0000180376 Malus domestica MDP0000180376 I
MDP0000269890 Malus domestica MDP0000269890 I
MDP0000273574 Malus domestica MDP0000273574 I
MDP0000307685 Malus domestica MDP0000307685 I
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I
cassava36544.valid.m1 Manihot esculenta cassava36544.valid.m1 I
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I
MTR_2g098310 Medicago truncatula MTR_2g098310 I
mgf002701m Mimulus guttatus mgf002701m I
mgf005043m Mimulus guttatus mgf005043m I
mgf016734m Mimulus guttatus mgf016734m I
mgf018372m Mimulus guttatus mgf018372m N
GSMUA_Achr3G11110_001 Musa acuminata GSMUA_Achr3G11110_001 I
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I
GSMUA_Achr9G27780_001 Musa acuminata GSMUA_Achr9G27780_001 I
OBART02G23210 Oryza barthii OBART02G23210 I
OBART08G19860 Oryza barthii OBART08G19860 I
OBART09G14660 Oryza barthii OBART09G14660 I
OB02G30670 Oryza brachyantha OB02G30670 I
OB08G26810 Oryza brachyantha OB08G26810 I
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I
BGIOSGA008576 Oryza indica BGIOSGA008576 I
BGIOSGA028963 Oryza indica BGIOSGA028963 I
BGIOSGA031008 Oryza indica BGIOSGA031008 I
OLONG_009256 Oryza longistaminata OLONG_009256 I
OLONG_017566 Oryza longistaminata OLONG_017566 I
OMERI02G22740 Oryza meridionalis OMERI02G22740 I
OMERI08G16700 Oryza meridionalis OMERI08G16700 I
OMERI09G11370 Oryza meridionalis OMERI09G11370 I
ONIVA02G26110 Oryza nivara ONIVA02G26110 I
ONIVA08G17500 Oryza nivara ONIVA08G17500 I
ONIVA08G22410 Oryza nivara ONIVA08G22410 I
OPUNC02G21170 Oryza punctata OPUNC02G21170 I
OPUNC08G18020 Oryza punctata OPUNC08G18020 I
OPUNC09G13060 Oryza punctata OPUNC09G13060 I
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I
OS08G0506700 Oryza sativa OS08G0506700 D
OS09G0487900 Oryza sativa OS09G0487900 I
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I
Pavir.Ba01718 Panicum virgatum Pavir.Ba01718 I
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I
Pavir.J00377 Panicum virgatum Pavir.J00377 I
Pavir.J08536 Panicum virgatum Pavir.J08536 I
Pavir.J14004 Panicum virgatum Pavir.J14004 I
PDK_20s1302565g001 Phoenix dactylifera PDK_20s1302565g001 I
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I
e_gw1.34.393.1 Physcomitrella patens e_gw1.34.393.1 I
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I
Pm000447 Prunus mume Pm000447 I
Pm004181 Prunus mume Pm004181 I
Pm007619 Prunus mume Pm007619 I
Pm016406 Prunus mume Pm016406 I
Pm025821 Prunus mume Pm025821 I
PRUPE_ppa006134mg Prunus persica PRUPE_ppa006134mg I
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I
29216.m000261 Ricinus communis 29216.m000261 I
30149.m000231 Ricinus communis 30149.m000231 I
30152.m002405 Ricinus communis 30152.m002405 I
30169.m006403 Ricinus communis 30169.m006403 I
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I
Si010513m.g Setaria italica Si010513m.g I
Si017194m.g Setaria italica Si017194m.g I
Si029614m.g Setaria italica Si029614m.g I
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I
Solyc11g056650.1 Solanum lycopersicum Solyc11g056650.1 I
Solyc12g100140.1 Solanum lycopersicum Solyc12g100140.1 I
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I
PGSC0003DMG400022058 Solanum tuberosum PGSC0003DMG400022058 I
PGSC0003DMG400023852 Solanum tuberosum PGSC0003DMG400023852 I
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I
Sb02g028300 Sorghum bicolor Sb02g028300 I
Sb04g025260 Sorghum bicolor Sb04g025260 I
Sb06g020810 Sorghum bicolor Sb06g020810 I
TCM_005925 Theobroma cacao TCM_005925 I
TCM_020066 Theobroma cacao TCM_020066 I
TCM_024842 Theobroma cacao TCM_024842 I
TCM_036484 Theobroma cacao TCM_036484 I
TCM_040564 Theobroma cacao TCM_040564 I
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I
TRIUR3_26625 Triticum urartu TRIUR3_26625 I
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I
GRMZM2G085467 Zea mays GRMZM2G085467 I
GRMZM2G417597 Zea mays GRMZM2G417597 I
GRMZM2G437481 Zea mays GRMZM2G437481 I