nLs.2.1.2.g05858 (Litomosoides sigmodontis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nLs.2.1.2.g05858 T309841_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.992 0.929
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t05858-RA Nuclear receptor 110 179

Links

Other Nuclear receptor family TFs
Other Litomosoides sigmodontis TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.889
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.993
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.898
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.993
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.893
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.757
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.990
ASU_01199 Ascaris suum ASU_01199 I
ASU_04305 Ascaris suum ASU_04305 I
ASU_10946 Ascaris suum ASU_10946 I 0.993
Bm12053 Brugia malayi Bm12053 I 0.889
Bm14724 Brugia malayi Bm14724 I 0.993
Bm2389 Brugia malayi Bm2389 I
Bm4894 Brugia malayi Bm4894 I 0.889
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.993
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.889
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.775
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.985
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.839
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.826
CBN07936 Caenorhabditis brenneri CBN07936 I 0.887
CBN13729 Caenorhabditis brenneri CBN13729 I
CBN18797 Caenorhabditis brenneri CBN18797 I
CBN19233 Caenorhabditis brenneri CBN19233 I 0.992
CBN20828 Caenorhabditis brenneri CBN20828 I 0.887
CBN25890 Caenorhabditis brenneri CBN25890 N
CBN26258 Caenorhabditis brenneri CBN26258 I
CBN31048 Caenorhabditis brenneri CBN31048 I 0.745
CBG06052 Caenorhabditis briggsae CBG06052 I
CBG07552 Caenorhabditis briggsae CBG07552 I 0.992
CBG17744 Caenorhabditis briggsae CBG17744 I
CBG19594 Caenorhabditis briggsae CBG19594 I 0.745
CBG19604 Caenorhabditis briggsae CBG19604 I 0.889
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.992
nhr-7 Caenorhabditis elegans WBGene00003606 D
nhr-31 Caenorhabditis elegans WBGene00003625 I
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.887
nhr-119 Caenorhabditis elegans WBGene00003709 I
CJA04720 Caenorhabditis japonica CJA04720 I 0.889
CJA08328 Caenorhabditis japonica CJA08328 I
CJA13646 Caenorhabditis japonica CJA13646 I 0.992
CRE02711 Caenorhabditis remanei CRE02711 I
CRE06661 Caenorhabditis remanei CRE06661 I 0.745
CRE06667 Caenorhabditis remanei CRE06667 I 0.887
CRE10161 Caenorhabditis remanei CRE10161 I
CRE12779 Caenorhabditis remanei CRE12779 I
CRE15289 Caenorhabditis remanei CRE15289 I 0.992
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.987
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.889
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.993
DME_0000188101 Dracunculus medinensis DME_0000188101 I
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.745
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.881
EVEC_0000349901 Enterobius vermicularis EVEC_0000349901 I
EVEC_0000733201 Enterobius vermicularis EVEC_0000733201 N
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.826
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.984
GPLIN_001106000 Globodera pallida GPLIN_001106000 I
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.889
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.746
HCOI00769300 Haemonchus contortus HCOI00769300 I
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.898
HCOI01406200 Haemonchus contortus HCOI01406200 I
HCOI01716000 Haemonchus contortus HCOI01716000 I
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.993
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.898
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.889
LOAG_01074 Loa loa LOAG_01074 I
LOAG_05485 Loa loa LOAG_05485 I 0.889
LOAG_18352 Loa loa LOAG_18352 I 0.993
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.985
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.985
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.881
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.985
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.826
Minc01725 Meloidogyne incognita Minc01725 I 0.985
Minc13525 Meloidogyne incognita Minc13525 I 0.985
Minc15420 Meloidogyne incognita Minc15420 I 0.881
NECAME_04545 Necator americanus NECAME_04545 I 0.993
NECAME_05125 Necator americanus NECAME_05125 I 0.898
NECAME_12696 Necator americanus NECAME_12696 I
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.898
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.993
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.898
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.993
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.889
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.889
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.993
WBGene00241236 Onchocerca volvulus WBGene00241236 I
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.993
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.889
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.760
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.856
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.898
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.870
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I
PPA20304 Pristionchus pacificus PPA20304 I 0.988
PPA21285 Pristionchus pacificus PPA21285 I 0.870
Ppa-nhr-31 Pristionchus pacificus PPA24219 I
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.826
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.770
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.992
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.899
L596_g3809 Steinernema carpocapsae L596_g3809 I
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.810
L889_g29204 Steinernema feltiae L889_g29204 I 0.898
L889_g5777 Steinernema feltiae L889_g5777 I 0.843
L889_g6303 Steinernema feltiae L889_g6303 I 0.810
L889_g8361 Steinernema feltiae L889_g8361 I 0.771
L889_g8621 Steinernema feltiae L889_g8621 I
L893_g27196 Steinernema glaseri L893_g27196 I 0.810
L893_g27201 Steinernema glaseri L893_g27201 I
L893_g29388 Steinernema glaseri L893_g29388 I 0.826
L893_g29555 Steinernema glaseri L893_g29555 I 0.992
L893_g32432 Steinernema glaseri L893_g32432 I
L893_g6878 Steinernema glaseri L893_g6878 I 0.898
L898_g10316 Steinernema monticolum L898_g10316 I 0.770
L898_g14928 Steinernema monticolum L898_g14928 I 0.763
L898_g23965 Steinernema monticolum L898_g23965 I 0.810
L898_g24498 Steinernema monticolum L898_g24498 I 0.826
L898_g2799 Steinernema monticolum L898_g2799 I
L898_g4801 Steinernema monticolum L898_g4801 I 0.898
L892_g21738 Steinernema scapterisci L892_g21738 I 0.799
L892_g650 Steinernema scapterisci L892_g650 I 0.992
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.822
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.898
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.856
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.898
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.822
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.822
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.856
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.898
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I
SMUV_0000212501 Syphacia muris SMUV_0000212501 I
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.992
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.775
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.993
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.993
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.889
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.993
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.993
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.889