GLYMA0005S50 (Glycine max)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GLYMA0005S50 T322555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.951 0.733
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.908 0.800
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.901 0.720
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.901 0.720
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.901 0.720
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.898 0.693
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.895 0.667
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.893 0.720
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.892 0.733
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.889 0.707
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.888 0.720
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA0005S50.1 SBP 172 246
GLYMA0005S50.2 SBP 172 246

Links

Other SBP family TFs
Other Glycine max TFs

382 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I
CBN21486 Caenorhabditis brenneri CBN21486 I
CBN28290 Caenorhabditis brenneri CBN28290 I
CBG09320 Caenorhabditis briggsae CBG09320 I
nhr-218 Caenorhabditis elegans WBGene00011750 I
nhr-142 Caenorhabditis elegans WBGene00018430 D
nhr-213 Caenorhabditis elegans WBGene00011520 I
CJA28065 Caenorhabditis japonica CJA28065 I
CRE31070 Caenorhabditis remanei CRE31070 I
HCOI00483700 Haemonchus contortus HCOI00483700 I
HCOI01190000 Haemonchus contortus HCOI01190000 I
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I
L596_g14533 Steinernema carpocapsae L596_g14533 I
L596_g14590 Steinernema carpocapsae L596_g14590 I
L596_g14541 Steinernema carpocapsae L596_g14541 N
L596_g14537 Steinernema carpocapsae L596_g14537 I
L596_g14536 Steinernema carpocapsae L596_g14536 I
L596_g14532 Steinernema carpocapsae L596_g14532 I
L889_g8187 Steinernema feltiae L889_g8187 I
L889_g6804 Steinernema feltiae L889_g6804 I
L889_g6799 Steinernema feltiae L889_g6799 I
L889_g6797 Steinernema feltiae L889_g6797 I
L889_g6792 Steinernema feltiae L889_g6792 I
L889_g6694 Steinernema feltiae L889_g6694 I
L889_g6695 Steinernema feltiae L889_g6695 I
L889_g6798 Steinernema feltiae L889_g6798 I
L893_g18993 Steinernema glaseri L893_g18993 I
L893_g27935 Steinernema glaseri L893_g27935 N
L893_g27943 Steinernema glaseri L893_g27943 N
L898_g19014 Steinernema monticolum L898_g19014 I
L898_g4018 Steinernema monticolum L898_g4018 N
L898_g4015 Steinernema monticolum L898_g4015 N
L898_g4012 Steinernema monticolum L898_g4012 I
L898_g3515 Steinernema monticolum L898_g3515 I
L898_g32142 Steinernema monticolum L898_g32142 N
L898_g2944 Steinernema monticolum L898_g2944 N
L898_g2943 Steinernema monticolum L898_g2943 N
L898_g20180 Steinernema monticolum L898_g20180 I
L898_g19019 Steinernema monticolum L898_g19019 I
L898_g19012 Steinernema monticolum L898_g19012 I
L898_g12799 Steinernema monticolum L898_g12799 I
L892_g14818 Steinernema scapterisci L892_g14818 I
L892_g14817 Steinernema scapterisci L892_g14817 I
L892_g10843 Steinernema scapterisci L892_g10843 I
L892_g10842 Steinernema scapterisci L892_g10842 I
L892_g10840 Steinernema scapterisci L892_g10840 N
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I