OBART09G15750 (Oryza barthii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OBART09G15750 T322786_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.896 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G15750.1 SBP 45 119

Links

Other SBP family TFs
Other Oryza barthii TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.909
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.923
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.898
SPL13A Arabidopsis thaliana AT5G50570 I 0.896
SPL13A Arabidopsis thaliana AT5G50670 D 0.896
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.897
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.910
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.963
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.973
Bo3g024180 Brassica oleracea Bo3g024180 I 0.896
Bo9g097630 Brassica oleracea Bo9g097630 I 0.899
Bra022766 Brassica rapa Bra022766 I 0.893
PK02140.1 Cannabis sativa PK02140.1 I 0.906
PK14243.1 Cannabis sativa PK14243.1 N 0.894
PK19500.1 Cannabis sativa PK19500.1 I 0.927
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.896
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.896
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.905
Ca_01426 Cicer arietinum Ca_01426 I 0.894
Ca_05711 Cicer arietinum Ca_05711 I 0.908
Cla002666 Citrullus lanatus Cla002666 I 0.902
Cla004156 Citrullus lanatus Cla004156 I 0.892
Cla019579 Citrullus lanatus Cla019579 I 0.893
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.904
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.915
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.904
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.915
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.892
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.901
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.902
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.886
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.911
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.899
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.904
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.894
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.906
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.894
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.909
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.900
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.903
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.931
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.916
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.922
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.917
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.911
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.921
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.923
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.964
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.988
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.913
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.894
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.903
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.905
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.907
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.907
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.894
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.908
mgf003797m Mimulus guttatus mgf003797m I 0.947
mgf010913m Mimulus guttatus mgf010913m I 0.947
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.928
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.913
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.904
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.899
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.931
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.915
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.936
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.924
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.927
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.932
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.924
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.929
OBART01G42150 Oryza barthii OBART01G42150 I 0.900
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.923
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.967
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.913
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.923
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.970
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.988
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.923
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.923
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.970
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.892
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.923
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.962
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.988
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.923
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.962
OPUNC09G14110 Oryza punctata OPUNC09G14110 N 0.756
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.923
ORUFI08G24030 Oryza rufipogon ORUFI08G24030 N 0.935
OS01G0922600 Oryza sativa OS01G0922600 I 0.904
SPL16 Oryza sativa OS08G0531600 I 0.970
SPL18 Oryza sativa OS09G0507100 I 0.988
SPL19 Oryza sativa OS11G0496600 I 0.913
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.960
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.890
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.955
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.920
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.890
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.955
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.960
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.902
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.903
Pm024528 Prunus mume Pm024528 I 0.902
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.902
29929.m004627 Ricinus communis 29929.m004627 I 0.907
30147.m014478 Ricinus communis 30147.m014478 I 0.893
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.895
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.898
Si001804m.g Setaria italica Si001804m.g I 0.890
Si013747m.g Setaria italica Si013747m.g N 0.955
Si026656m.g Setaria italica Si026656m.g I 0.920
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.912
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.912
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.973
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.924
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.938
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.940
TCM_008671 Theobroma cacao TCM_008671 I 0.922
TCM_014668 Theobroma cacao TCM_014668 I 0.905
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.918
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.886
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.893
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.973
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.938
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.905
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.891