PPA14042 (Pristionchus pacificus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PPA14042 T332183_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA14042 Sox 18 82

Links

Other Sox family TFs
Other Pristionchus pacificus TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.502
AAEL011425 Aedes aegypti AAEL011425 I 0.418
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.438
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.438
AMTR_s00046p00227790 Amborella trichopoda AMTR_s00046p00227790 N 0.463
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.439
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.425
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.443
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.443
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.443
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.450
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.443
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.450
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.443
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.450
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.445
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.497
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.461
ASU_05994 Ascaris suum ASU_05994 N 0.488
ASU_09087 Ascaris suum ASU_09087 N 0.461
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.471
Bm8632 Brugia malayi Bm8632 N 0.502
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.527
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.535
CBG04066 Caenorhabditis briggsae CBG04066 N 0.448
CBG09136 Caenorhabditis briggsae CBG09136 N 0.418
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.486
CJA04355 Caenorhabditis japonica CJA04355 N 0.483
CRE03995 Caenorhabditis remanei CRE03995 N 0.437
CRE11852 Caenorhabditis remanei CRE11852 N 0.489
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.421
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.421
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.421
KGM_13851 Danaus plexippus KGM_13851 N 0.446
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.446
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.445
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.502
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.490
GF12460 Drosophila ananassae FBgn0089497 N 0.472
GG19998 Drosophila erecta FBgn0112197 N 0.472
GH21151 Drosophila grimshawi FBgn0128613 N 0.478
Ssrp Drosophila melanogaster FBgn0010278 N 0.472
GI18750 Drosophila mojavensis FBgn0141489 N 0.505
GL11071 Drosophila persimilis FBgn0148681 N 0.432
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.432
GD25013 Drosophila simulans FBgn0196325 N 0.472
GJ21774 Drosophila virilis FBgn0208892 N 0.472
GK22092 Drosophila willistoni FBgn0224077 N 0.501
GE11532 Drosophila yakuba FBgn0229332 N 0.472
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.481
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.450
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.450
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.421
HMEL015307 Heliconius melpomene HMEL015307 N 0.471
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.476
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.502
LOAG_08062 Loa loa LOAG_08062 N 0.502
LCUP005047 Lucilia cuprina LCUP005047 N 0.472
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.431
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.448
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.448
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.431
Minc01744 Meloidogyne incognita Minc01744 N 0.454
Minc03634 Meloidogyne incognita Minc03634 N 0.431
Minc04648 Meloidogyne incognita Minc04648 N 0.431
Minc10016 Meloidogyne incognita Minc10016 N 0.454
MDOA007633 Musca domestica MDOA007633 N 0.472
NECAME_17555 Necator americanus NECAME_17555 N 0.445
NECAME_17981 Necator americanus NECAME_17981 N 0.445
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.450
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.415
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.450
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.427
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.502
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.502
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.455
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.455
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.430
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.416
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.430
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.445
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.498
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.498
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.475
PPA02261 Pristionchus pacificus PPA02261 N 0.475
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.498
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.427
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.421
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.432
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.426
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.494
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.490
L889_g16198 Steinernema feltiae L889_g16198 N 0.463
L889_g29516 Steinernema feltiae L889_g29516 N 0.423
L889_g6592 Steinernema feltiae L889_g6592 N 0.437
L889_g9094 Steinernema feltiae L889_g9094 N 0.488
L893_g23503 Steinernema glaseri L893_g23503 N 0.469
L893_g29974 Steinernema glaseri L893_g29974 N 0.490
L898_g4830 Steinernema monticolum L898_g4830 N 0.490
L898_g7743 Steinernema monticolum L898_g7743 N 0.463
L892_g19058 Steinernema scapterisci L892_g19058 N 0.490
L892_g23618 Steinernema scapterisci L892_g23618 N 0.496
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.459
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.416
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.416
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.459
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.459
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.416
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.524
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.450
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.467
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.488
TC012866 Tribolium castaneum TC012866 N 0.478
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.419