Si017699m.g (Setaria italica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Si017699m.g T332545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si017699m Sox 164 208

Links

Other Sox family TFs
Other Setaria italica TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I
AT5G51780 Arabidopsis thaliana AT5G51780 I
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I
Bo7g110280 Brassica oleracea Bo7g110280 I
Bra019167 Brassica rapa Bra019167 I
PK15358.1 Cannabis sativa PK15358.1 I
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I
Carubv10027166m.g Capsella rubella Carubv10027166m.g I
Ca_22233 Cicer arietinum Ca_22233 I
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I
Cucsa.302590 Cucumis sativus Cucsa.302590 N
Eucgr.E00512 Eucalyptus grandis Eucgr.E00512 N
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I
GLYMA16G32620 Glycine max GLYMA16G32620 N
GLYMA09G27630 Glycine max GLYMA09G27630 N
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I
MDP0000246258 Malus domestica MDP0000246258 I
cassava45968.m1 Manihot esculenta cassava45968.m1 I
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I
cassava21379.m1 Manihot esculenta cassava21379.m1 I
MTR_1g102370 Medicago truncatula MTR_1g102370 N
MTR_0007s0380 Medicago truncatula MTR_0007s0380 N
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I
Pm019419 Prunus mume Pm019419 I
30147.m014147 Ricinus communis 30147.m014147 N
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I
Solyc03g006910.2 Solanum lycopersicum Solyc03g006910.2 N
PGSC0003DMG400007559 Solanum tuberosum PGSC0003DMG400007559 N
TCM_016134 Theobroma cacao TCM_016134 I
TCM_016133 Theobroma cacao TCM_016133 I