CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TCM_016133
(
Theobroma cacao
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
TCM_016133
T045379_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT4G25400
M09786_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT4G25400_01
0.845
0.577
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY24562
bHLH
76
128
KKIIHRDIERQRRQEMATLYRALRLQLPLEYLKGKRSISDHMHEAVNYIKHLQ
Links
Other
bHLH
family TFs
Other
Theobroma cacao
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_016134
Theobroma cacao
TCM_016134
I
0.914
cassava43207.valid.m1
Manihot esculenta
cassava43207.valid.m1
I
0.886
Carubv10027166m.g
Capsella rubella
Carubv10027166m.g
I
0.886
POPTR_0012s14080
Populus trichocarpa
POPTR_0012s14080
I
0.886
Bostr.15774s0324
Boechera stricta
Bostr.15774s0324
I
0.886
Cagra.0277s0021
Capsella grandiflora
Cagra.0277s0021
I
0.886
gene32346-v1.0-hybrid
Fragaria vesca
gene32346-v1.0-hybrid
N
0.882
Pm019419
Prunus mume
Pm019419
I
0.875
Solyc06g035490.2
Solanum lycopersicum
Solyc06g035490.2
I
0.875
LjSGA_023375.1
Lotus japonicus
LjSGA_023375.1
I
0.875
cassava45968.m1
Manihot esculenta
cassava45968.m1
I
0.874
Thhalv10026341m.g
Eutrema salsugineum
Thhalv10026341m.g
I
0.866
AT5G51780
Arabidopsis thaliana
AT5G51780
I
0.866
fgenesh2_kg.8__1059__AT5G51780.1
Arabidopsis lyrata
fgenesh2_kg.8__1059__AT5G51780.1
I
0.866
Bo7g110280
Brassica oleracea
Bo7g110280
I
0.866
Ca_22233
Cicer arietinum
Ca_22233
I
0.863
PK15358.1
Cannabis sativa
PK15358.1
I
0.863
Ciclev10006628m.g
Citrus clementina
Ciclev10006628m.g
I
0.862
orange1.1g036406m.g
Citrus sinensis
orange1.1g036406m.g
I
0.862
Cucsa.302590
Cucumis sativus
Cucsa.302590
N
0.862
cassava21379.m1
Manihot esculenta
cassava21379.m1
I
0.862
MDP0000246258
Malus domestica
MDP0000246258
I
0.854
Thhalv10009922m.g
Eutrema salsugineum
Thhalv10009922m.g
I
0.853
Bra019167
Brassica rapa
Bra019167
I
0.853
Gorai.008G282300
Gossypium raimondii
Gorai.008G282300
I
0.852
Gorai.006G196500
Gossypium raimondii
Gorai.006G196500
I
0.852
GLYMA09G27630
Glycine max
GLYMA09G27630
N
0.851
MTR_0007s0380
Medicago truncatula
MTR_0007s0380
N
0.851
gene13365-v1.0-hybrid
Fragaria vesca
gene13365-v1.0-hybrid
N
0.851
30147.m014147
Ricinus communis
30147.m014147
N
0.851
MTR_1g102370
Medicago truncatula
MTR_1g102370
N
0.851
Eucgr.E00512
Eucalyptus grandis
Eucgr.E00512
N
0.847
Bostr.7867s0349
Boechera stricta
Bostr.7867s0349
I
0.845
AT4G25400
Arabidopsis thaliana
AT4G25400
D
0.845
Carubv10011792m.g
Capsella rubella
Carubv10011792m.g
N
0.844
Cagra.0568s0165
Capsella grandiflora
Cagra.0568s0165
N
0.844
GLYMA09G27610
Glycine max
GLYMA09G27610
I
0.843
GLYMA16G32610
Glycine max
GLYMA16G32610
I
0.843
PK11667.1
Cannabis sativa
PK11667.1
I
0.843
Bra022562
Brassica rapa
Bra022562
I
0.842
Lus10027394.g
Linum usitatissimum
Lus10027394.g
N
0.842
GLYMA16G32620
Glycine max
GLYMA16G32620
N
0.840
Aquca_035_00249
Aquilegia coerulea
Aquca_035_00249
N
0.839