GLOTRDRAFT_114940 (Gloeophyllum trabeum)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 GLOTRDRAFT_114940 T342569_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.892 0.892
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.892 0.892
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.892 0.892
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.808 0.808
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.808 0.808
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.808 0.808
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.808 0.808
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.808 0.808
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.808 0.808
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.808 0.808
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.808 0.808
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.808 0.808
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPQ58556 TBP 134 216
EPQ58556 TBP 224 307

Links

Other TBP family TFs
Other Gloeophyllum trabeum TFs

760 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00289 Aquilegia coerulea Aquca_004_00289 I
Aquca_009_00736 Aquilegia coerulea Aquca_009_00736 I
fgenesh2_kg.4__1876__AT2G38090.1 Arabidopsis lyrata fgenesh2_kg.4__1876__AT2G38090.1 I
fgenesh2_kg.8__1829__AT5G58900.1 Arabidopsis lyrata fgenesh2_kg.8__1829__AT5G58900.1 I
AT5G58900 Arabidopsis thaliana AT5G58900 D
Bostr.23794s0264 Boechera stricta Bostr.23794s0264 I
Bostr.26833s0356 Boechera stricta Bostr.26833s0356 I
Bostr.6251s0088 Boechera stricta Bostr.6251s0088 I
Bo3g032160 Brassica oleracea Bo3g032160 I
Bo4g029810 Brassica oleracea Bo4g029810 I
Bo4g187390 Brassica oleracea Bo4g187390 I
Bo9g135730 Brassica oleracea Bo9g135730 I
Bra000038 Brassica rapa Bra000038 I
Bra002610 Brassica rapa Bra002610 I
Bra005139 Brassica rapa Bra005139 I
Bra017138 Brassica rapa Bra017138 I
PK27213.1 Cannabis sativa PK27213.1 D
PK27693.1 Cannabis sativa PK27693.1 D
Cagra.0090s0025 Capsella grandiflora Cagra.0090s0025 I
Cagra.0891s0087 Capsella grandiflora Cagra.0891s0087 I
Carubv10023736m.g Capsella rubella Carubv10023736m.g I
Carubv10026903m.g Capsella rubella Carubv10026903m.g I
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I
Ca_12513 Cicer arietinum Ca_12513 I
Ca_14247 Cicer arietinum Ca_14247 I
Ca_15603 Cicer arietinum Ca_15603 I
Ca_19327 Cicer arietinum Ca_19327 I
Cla004397 Citrullus lanatus Cla004397 I
Cla013553 Citrullus lanatus Cla013553 I
Cla018243 Citrullus lanatus Cla018243 I
Cla018399 Citrullus lanatus Cla018399 I
Ciclev10012285m.g Citrus clementina Ciclev10012285m.g I
Ciclev10028910m.g Citrus clementina Ciclev10028910m.g I
orange1.1g021756m.g Citrus sinensis orange1.1g021756m.g I
orange1.1g021816m.g Citrus sinensis orange1.1g021816m.g I
Cucsa.067080 Cucumis sativus Cucsa.067080 I
Cucsa.139090 Cucumis sativus Cucsa.139090 I
Cucsa.164580 Cucumis sativus Cucsa.164580 I
Cucsa.176140 Cucumis sativus Cucsa.176140 I
Eucgr.B02800 Eucalyptus grandis Eucgr.B02800 I
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I
Thhalv10014410m.g Eutrema salsugineum Thhalv10014410m.g I
Thhalv10017008m.g Eutrema salsugineum Thhalv10017008m.g I
gene07984-v1.0-hybrid Fragaria vesca gene07984-v1.0-hybrid I
gene18815-v1.0-hybrid Fragaria vesca gene18815-v1.0-hybrid I
GLYMA01G27720 Glycine max GLYMA01G27720 I
GLYMA02G39000 Glycine max GLYMA02G39000 I
GLYMA02G42140 Glycine max GLYMA02G42140 I
GLYMA03G14440 Glycine max GLYMA03G14440 I
GLYMA07G17660 Glycine max GLYMA07G17660 I
GLYMA11G22960 Glycine max GLYMA11G22960 I
GLYMA11G34930 Glycine max GLYMA11G34930 I
GLYMA14G06750 Glycine max GLYMA14G06750 I
GLYMA14G37050 Glycine max GLYMA14G37050 I
GLYMA18G03430 Glycine max GLYMA18G03430 I
GLYMA18G42530 Glycine max GLYMA18G42530 I
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I
Lus10009884.g Linum usitatissimum Lus10009884.g I
Lus10018209.g Linum usitatissimum Lus10018209.g I
Lus10028264.g Linum usitatissimum Lus10028264.g I
Lus10035518.g Linum usitatissimum Lus10035518.g I
Lus10040696.g Linum usitatissimum Lus10040696.g I
MDP0000142580 Malus domestica MDP0000142580 I
MDP0000221993 Malus domestica MDP0000221993 I
cassava1257.valid.m1 Manihot esculenta cassava1257.valid.m1 I
cassava23290.valid.m1 Manihot esculenta cassava23290.valid.m1 I
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I
cassava26873.m1 Manihot esculenta cassava26873.m1 I
cassava30173.valid.m1 Manihot esculenta cassava30173.valid.m1 I
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I
MTR_3g462790 Medicago truncatula MTR_3g462790 I
MTR_5g069710 Medicago truncatula MTR_5g069710 I
MTR_5g081860 Medicago truncatula MTR_5g081860 I
MTR_7g067080 Medicago truncatula MTR_7g067080 I
mgf022442m Mimulus guttatus mgf022442m I
GSMUA_Achr8G02380_001 Musa acuminata GSMUA_Achr8G02380_001 I
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I
POPTR_0009s04730 Populus trichocarpa POPTR_0009s04730 I
POPTR_0010s20040 Populus trichocarpa POPTR_0010s20040 I
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I
Pm000529 Prunus mume Pm000529 I
Pm002536 Prunus mume Pm002536 I
Pm018878 Prunus mume Pm018878 I
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I
PRUPE_ppa009103mg Prunus persica PRUPE_ppa009103mg I
PRUPE_ppa018139mg Prunus persica PRUPE_ppa018139mg I
28288.m000014 Ricinus communis 28288.m000014 I
29610.m000410 Ricinus communis 29610.m000410 I
29681.m001296 Ricinus communis 29681.m001296 I
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I
SapurV1A.0262s0080 Salix purpurea SapurV1A.0262s0080 I
SapurV1A.0709s0190 Salix purpurea SapurV1A.0709s0190 I
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I
Solyc06g076770.2 Solanum lycopersicum Solyc06g076770.2 I
Solyc09g014250.2 Solanum lycopersicum Solyc09g014250.2 I
Solyc10g076820.1 Solanum lycopersicum Solyc10g076820.1 I
PGSC0003DMG400019129 Solanum tuberosum PGSC0003DMG400019129 I
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I
PGSC0003DMG400030348 Solanum tuberosum PGSC0003DMG400030348 I
TCM_021750 Theobroma cacao TCM_021750 I
TCM_041672 Theobroma cacao TCM_041672 I
VIT_06s0004g06100 Vitis vinifera VIT_06s0004g06100 I
VIT_08s0007g01920 Vitis vinifera VIT_08s0007g01920 I