Sb02g042760 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb02g042760 T004975_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.680 0.816
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.680 0.816
HRE1
M06595_2.00 		Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN		 Dap-seq
OMalley et al.(2016)
ERF73_col_a 		0.678 0.796
HRE1
M06596_2.00 		Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND		 Dap-seq
OMalley et al.(2016)
ERF73_colamp_a 		0.678 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g042760.1 AP2 68 119

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.814
Si031079m.g Setaria italica Si031079m.g I 0.811
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.811
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.811
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.805
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.805
OBART07G26160 Oryza barthii OBART07G26160 N 0.805
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.805
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.805
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.805
OS07G0674800 Oryza sativa OS07G0674800 N 0.805
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.805
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.805
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.800
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.800
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.800
OS03G0341000 Oryza sativa OS03G0341000 N 0.800
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.800
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.800
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.800
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.800
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.800
Traes_2AS_72E9B68D2 Triticum aestivum Traes_2AS_72E9B68D2 I 0.765
Traes_2BS_5E7287209 Triticum aestivum Traes_2BS_5E7287209 I 0.765
MLOC_51143 Hordeum vulgare MLOC_51143 I 0.765
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.742
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.742
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.742
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.742
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.742
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.742
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.742
Si002845m.g Setaria italica Si002845m.g I 0.742
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.742
OS01G0313300 Oryza sativa OS01G0313300 I 0.742
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.742
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.742
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.742
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.742
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.742
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.736
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.731
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N 0.728
OPUNC03G05900 Oryza punctata OPUNC03G05900 I 0.725
AC206951.3_FG016 Zea mays AC206951.3_FG016 N 0.724
GSMUA_Achr11G15810_001 Musa acuminata GSMUA_Achr11G15810_001 I 0.721
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.720
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.718
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.716
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.716
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.716
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.716
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.712
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.711
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.711
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.711
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.711
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.707
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.707
Aquca_076_00008 Aquilegia coerulea Aquca_076_00008 I 0.706
Pavir.Ib00528 Panicum virgatum Pavir.Ib00528 I 0.706
Si036118m.g Setaria italica Si036118m.g I 0.705
GSMUA_AchrUn_randomG09790_001 Musa acuminata GSMUA_AchrUn_randomG09790_001 I 0.705
GSMUA_AchrUn_randomG27100_001 Musa acuminata GSMUA_AchrUn_randomG27100_001 I 0.705
29900.m001561 Ricinus communis 29900.m001561 I 0.705
BGIOSGA011326 Oryza indica BGIOSGA011326 I 0.704
ORGLA03G0058900 Oryza glaberrima ORGLA03G0058900 I 0.704
OS03G0183300 Oryza sativa OS03G0183300 I 0.704
ONIVA03G06110 Oryza nivara ONIVA03G06110 I 0.704
OMERI03G05920 Oryza meridionalis OMERI03G05920 I 0.704
OGLUM03G06100 Oryza glumaepatula OGLUM03G06100 I 0.704
OBART03G06100 Oryza barthii OBART03G06100 I 0.704
GRMZM2G148333 Zea mays GRMZM2G148333 I 0.703
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.702
GSMUA_Achr2G17810_001 Musa acuminata GSMUA_Achr2G17810_001 I 0.701
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.701
GRMZM2G125460 Zea mays GRMZM2G125460 N 0.700
Lus10021873.g Linum usitatissimum Lus10021873.g I 0.699
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.699
mgf023779m Mimulus guttatus mgf023779m I 0.699
GSMUA_Achr3G08170_001 Musa acuminata GSMUA_Achr3G08170_001 I 0.698
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.697
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.696
Pavir.Ia04158 Panicum virgatum Pavir.Ia04158 I 0.696
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.695
Gorai.010G156600 Gossypium raimondii Gorai.010G156600 I 0.695
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.692
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.691
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.691
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I 0.691
Si030514m.g Setaria italica Si030514m.g I 0.691
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.690
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.690
gene06406-v1.0-hybrid Fragaria vesca gene06406-v1.0-hybrid I 0.690
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.690
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.690
MDP0000322279 Malus domestica MDP0000322279 I 0.690
TCM_026233 Theobroma cacao TCM_026233 I 0.690
GRMZM2G114820 Zea mays GRMZM2G114820 I 0.690
ONIVA10G08250 Oryza nivara ONIVA10G08250 I 0.689
OGLUM10G08400 Oryza glumaepatula OGLUM10G08400 I 0.689
ATERF2 Arabidopsis lyrata fgenesh2_kg.8__70__AT5G47220.1 I 0.689
OMERI10G05820 Oryza meridionalis OMERI10G05820 I 0.689
BGIOSGA032849 Oryza indica BGIOSGA032849 I 0.689
ORUFI10G09060 Oryza rufipogon ORUFI10G09060 I 0.689
ORGLA10G0072500 Oryza glaberrima ORGLA10G0072500 I 0.689
OS10G0390800 Oryza sativa OS10G0390800 I 0.689
MDP0000190237 Malus domestica MDP0000190237 I 0.687
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.687
GRMZM2G131281 Zea mays GRMZM2G131281 I 0.687
Sb02g029550 Sorghum bicolor Sb02g029550 I 0.687
ONIVA02G20490 Oryza nivara ONIVA02G20490 I 0.686
OPUNC02G16450 Oryza punctata OPUNC02G16450 I 0.686
ORUFI02G19470 Oryza rufipogon ORUFI02G19470 I 0.686
Bostr.10273s0115 Boechera stricta Bostr.10273s0115 I 0.686
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.686
Pavir.Aa02595 Panicum virgatum Pavir.Aa02595 I 0.686
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.686
Sb04g021160 Sorghum bicolor Sb04g021160 I 0.686
Si018024m.g Setaria italica Si018024m.g I 0.686
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.686
BGIOSGA006362 Oryza indica BGIOSGA006362 I 0.686
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.685
Si033388m.g Setaria italica Si033388m.g I 0.684
mgf018693m Mimulus guttatus mgf018693m I 0.684
GSMUA_Achr10G31090_001 Musa acuminata GSMUA_Achr10G31090_001 I 0.684
Sb01g045040 Sorghum bicolor Sb01g045040 I 0.683
ORGLA05G0114900 Oryza glaberrima ORGLA05G0114900 I 0.683
OS05G0361700 Oryza sativa OS05G0361700 I 0.683
Bra030095 Brassica rapa Bra030095 I 0.683
MDP0000668122 Malus domestica MDP0000668122 I 0.683
OBART02G18470 Oryza barthii OBART02G18470 I 0.683
OGLUM05G14230 Oryza glumaepatula OGLUM05G14230 I 0.683
ONIVA05G14090 Oryza nivara ONIVA05G14090 I 0.683
ORUFI05G14490 Oryza rufipogon ORUFI05G14490 I 0.683
OPUNC05G11600 Oryza punctata OPUNC05G11600 I 0.683
BGIOSGA019701 Oryza indica BGIOSGA019701 I 0.683
OB05G21350 Oryza brachyantha OB05G21350 I 0.683
GSMUA_Achr10G19950_001 Musa acuminata GSMUA_Achr10G19950_001 I 0.683
Bo7g048170 Brassica oleracea Bo7g048170 I 0.683
F775_05346 Aegilops tauschii F775_05346 I 0.682
BRADI1G72450 Brachypodium distachyon BRADI1G72450 I 0.682
Sb09g017950 Sorghum bicolor Sb09g017950 I 0.682
Pavir.J21082 Panicum virgatum Pavir.J21082 I 0.682
Pavir.Cb01365 Panicum virgatum Pavir.Cb01365 I 0.682
Si030810m.g Setaria italica Si030810m.g I 0.682
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.680
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.680
RAP2-12 Arabidopsis thaliana AT1G53910 D 0.680
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.680
Thhalv10011606m.g Eutrema salsugineum Thhalv10011606m.g I 0.680
Carubv10009538m.g Capsella rubella Carubv10009538m.g I 0.680
RAP2.12 Arabidopsis lyrata scaffold_105235.1 I 0.680
Cagra.0769s0008 Capsella grandiflora Cagra.0769s0008 I 0.680
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.680
Bra021594 Brassica rapa Bra021594 I 0.680
Ca_07754 Cicer arietinum Ca_07754 I 0.680
Bostr.7128s0090 Boechera stricta Bostr.7128s0090 I 0.680
mgf019280m Mimulus guttatus mgf019280m I 0.679
MTR_6g033255 Medicago truncatula MTR_6g033255 I 0.679
LPERR03G05410 Leersia perrieri LPERR03G05410 N 0.679
MLOC_64636 Hordeum vulgare MLOC_64636 I 0.679
Gorai.008G075600 Gossypium raimondii Gorai.008G075600 I 0.679
Pavir.J02402 Panicum virgatum Pavir.J02402 I 0.678
TCM_004710 Theobroma cacao TCM_004710 I 0.678
Pavir.Ba00410 Panicum virgatum Pavir.Ba00410 I 0.678
HRE2 Vitis vinifera VIT_07s0005g00820 I 0.678
HRE1 Arabidopsis thaliana AT1G72360 D 0.678
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.677
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.677
Bo1g129710 Brassica oleracea Bo1g129710 I 0.677
Gorai.007G045100 Gossypium raimondii Gorai.007G045100 I 0.677
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.677
Pavir.Ib02796 Panicum virgatum Pavir.Ib02796 I 0.677
Pavir.J05942 Panicum virgatum Pavir.J05942 I 0.677
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.677