gene25185-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene25185-v1.0-hybrid T008431_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24580.1
M01101_2.00 		Cannabis sativa
VGCCGGCM
KGCCGGCB		 PBM
Lambert et al.(2019)
pTH11280 		0.681 0.653
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna25185.1-v1.0-hybrid AP2 91 142

Links

Other AP2 family TFs
Other Fragaria vesca TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000166779 Malus domestica MDP0000166779 N 0.736
Cla018787 Citrullus lanatus Cla018787 N 0.733
Cucsa.121430 Cucumis sativus Cucsa.121430 N 0.725
Pm025195 Prunus mume Pm025195 N 0.713
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.710
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.710
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.710
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.709
PRUPE_ppb025303mg Prunus persica PRUPE_ppb025303mg N 0.707
Eucgr.G02326 Eucalyptus grandis Eucgr.G02326 I 0.704
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.695
Cla008128 Citrullus lanatus Cla008128 I 0.695
chr2.CM0903.260.nd Lotus japonicus chr2.CM0903.260.nd I 0.690
GLYMA01G20383 Glycine max GLYMA01G20383 I 0.685
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.684
PK24580.1 Cannabis sativa PK24580.1 D 0.681
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.677