GLYMA10G42130 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA10G42130 T001898_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.734 0.714
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.734 0.714
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.734 0.714
PK24580.1
M01101_2.00 		Cannabis sativa
VGCCGGCM
KGCCGGCB		 PBM
Lambert et al.(2019)
pTH11280 		0.732 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G42130.1 AP2 120 171
GLYMA10G42130.2 AP2 120 171

Links

Other AP2 family TFs
Other Glycine max TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.771
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.762
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.762
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.762
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.747
Cla008128 Citrullus lanatus Cla008128 I 0.747
ERF118 Arabidopsis thaliana AT1G68550 D 0.734
PK24580.1 Cannabis sativa PK24580.1 D 0.732
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I 0.732
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I 0.732
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.730
Eucgr.G02326 Eucalyptus grandis Eucgr.G02326 I 0.724
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.723
MDP0000743350 Malus domestica MDP0000743350 I 0.718
MDP0000119956 Malus domestica MDP0000119956 I 0.718
Ca_05485 Cicer arietinum Ca_05485 I 0.716
Solyc05g009450.1 Solanum lycopersicum Solyc05g009450.1 I 0.709
chr2.CM0903.260.nd Lotus japonicus chr2.CM0903.260.nd I 0.708
GLYMA01G20383 Glycine max GLYMA01G20383 I 0.707
GLYMA08G15830 Glycine max GLYMA08G15830 I 0.706
mgf006610m Mimulus guttatus mgf006610m I 0.703
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.703
Cla021763 Citrullus lanatus Cla021763 I 0.702
MDP0000759299 Malus domestica MDP0000759299 I 0.698
Pm029052 Prunus mume Pm029052 I 0.693
TCM_011811 Theobroma cacao TCM_011811 I 0.692
PGSC0003DMG400014541 Solanum tuberosum PGSC0003DMG400014541 I 0.692
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.692
gene03751-v1.0-hybrid Fragaria vesca gene03751-v1.0-hybrid I 0.689
Bostr.13158s0163 Boechera stricta Bostr.13158s0163 I 0.689
Carubv10017705m.g Capsella rubella Carubv10017705m.g I 0.688
Cagra.0483s0087 Capsella grandiflora Cagra.0483s0087 I 0.688
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.681
Cla000729 Citrullus lanatus Cla000729 I 0.680
cassava35757.valid.m1 Manihot esculenta cassava35757.valid.m1 I 0.679
27524.m000298 Ricinus communis 27524.m000298 I 0.679
cassava35758.valid.m1 Manihot esculenta cassava35758.valid.m1 I 0.679
cassava43300.valid.m1 Manihot esculenta cassava43300.valid.m1 I 0.679
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.679
POPTR_0008s11900 Populus trichocarpa POPTR_0008s11900 I 0.677
PRUPE_ppa008514mg Prunus persica PRUPE_ppa008514mg I 0.677
gene25185-v1.0-hybrid Fragaria vesca gene25185-v1.0-hybrid I 0.677
SapurV1A.0079s0190 Salix purpurea SapurV1A.0079s0190 I 0.677