cassava32762.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava32762.m1 T022272_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava32762.m1 B3 112 214

Links

Other B3 family TFs
Other Manihot esculenta TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si016562m.g Setaria italica Si016562m.g I 0.800
GRMZM2G137413 Zea mays GRMZM2G137413 I 0.789
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.781
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.781
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I 0.779
GSMUA_Achr6G29070_001 Musa acuminata GSMUA_Achr6G29070_001 I 0.779
OB02G28170 Oryza brachyantha OB02G28170 I 0.779
SELMODRAFT_438973 Selaginella moellendorffii SELMODRAFT_438973 I 0.771
SELMODRAFT_437944 Selaginella moellendorffii SELMODRAFT_437944 I 0.771
GSMUA_Achr10G16170_001 Musa acuminata GSMUA_Achr10G16170_001 I 0.768
PDK_20s1651081g001 Phoenix dactylifera PDK_20s1651081g001 I 0.767
Ciclev10019257m.g Citrus clementina Ciclev10019257m.g I 0.763
orange1.1g005060m.g Citrus sinensis orange1.1g005060m.g I 0.763
gene27792-v1.0-hybrid Fragaria vesca gene27792-v1.0-hybrid N 0.760
chr1.LjT43L07.10.nd Lotus japonicus chr1.LjT43L07.10.nd I 0.760
Aquca_003_00899 Aquilegia coerulea Aquca_003_00899 I 0.753
Pavir.Ga01750 Panicum virgatum Pavir.Ga01750 I 0.750
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.750
evm.TU.supercontig_9.161 Carica papaya evm.TU.supercontig_9.161 I 0.750
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I 0.750
Pavir.Gb01617 Panicum virgatum Pavir.Gb01617 I 0.750
SELMODRAFT_166729 Selaginella moellendorffii SELMODRAFT_166729 I 0.750
Si009558m.g Setaria italica Si009558m.g I 0.750
Sb06g017490 Sorghum bicolor Sb06g017490 I 0.750
BRADI3G45880 Brachypodium distachyon BRADI3G45880 I 0.750
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.750
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.745
AMTR_s00016p00168950 Amborella trichopoda AMTR_s00016p00168950 I 0.742
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.742
ARF9 Oryza sativa OS04G0442000 I 0.740
OMERI04G12260 Oryza meridionalis OMERI04G12260 I 0.740
ONIVA04G11850 Oryza nivara ONIVA04G11850 I 0.740
OGLUM04G13380 Oryza glumaepatula OGLUM04G13380 I 0.740
ORGLA04G0107000 Oryza glaberrima ORGLA04G0107000 I 0.740
SELMODRAFT_430287 Selaginella moellendorffii SELMODRAFT_430287 I 0.740
ORUFI04G14900 Oryza rufipogon ORUFI04G14900 I 0.740
GRMZM2G017187 Zea mays GRMZM2G017187 I 0.740
BGIOSGA016467 Oryza indica BGIOSGA016467 I 0.740
TCM_029792 Theobroma cacao TCM_029792 I 0.736
Traes_2BL_1AED96909 Triticum aestivum Traes_2BL_1AED96909 I 0.732
OB04G20880 Oryza brachyantha OB04G20880 I 0.732
Gorai.007G044900 Gossypium raimondii Gorai.007G044900 I 0.732
BRADI5G10950 Brachypodium distachyon BRADI5G10950 I 0.732
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.729
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.729
Ciclev10003317m.g Citrus clementina Ciclev10003317m.g I 0.729
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.729
GSMUA_Achr6G12780_001 Musa acuminata GSMUA_Achr6G12780_001 I 0.729
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.728
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.724
VIT_07s0104g01230 Vitis vinifera VIT_07s0104g01230 I 0.724
XM_002320618.1 Populus trichocarpa POPTR_0020s00210 I 0.724
SapurV1A.0499s0060 Salix purpurea SapurV1A.0499s0060 I 0.722
POPTR_0003s16210 Populus trichocarpa POPTR_0003s16210 I 0.722
SapurV1A.0340s0160 Salix purpurea SapurV1A.0340s0160 I 0.722
PK12669.1 Cannabis sativa PK12669.1 I 0.719
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.719
mgf020855m Mimulus guttatus mgf020855m I 0.719
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.719
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.719
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.719
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.719
Cla019614 Citrullus lanatus Cla019614 I 0.719
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.719
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.719
Ca_21948 Cicer arietinum Ca_21948 I 0.719
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.719
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.719
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.719
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.719
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.719
OB05G33320 Oryza brachyantha OB05G33320 I 0.719
Si021216m.g Setaria italica Si021216m.g I 0.719
Si000340m.g Setaria italica Si000340m.g I 0.719
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.714
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.714
TCM_004526 Theobroma cacao TCM_004526 I 0.714
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I 0.714
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.714
POPTR_0014s12980 Populus trichocarpa POPTR_0014s12980 I 0.714
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I 0.714
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I 0.714
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.714
GLYMA01G25270 Glycine max GLYMA01G25270 I 0.714
30068.m002516 Ricinus communis 30068.m002516 I 0.714
Ciclev10019174m.g Citrus clementina Ciclev10019174m.g I 0.711
Sb03g000530 Sorghum bicolor Sb03g000530 I 0.711
Pavir.Ea00026 Panicum virgatum Pavir.Ea00026 I 0.711
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.711
PDK_20s1869091g001 Phoenix dactylifera PDK_20s1869091g001 I 0.711
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.711
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.711
MDP0000929655 Malus domestica MDP0000929655 I 0.711
orange1.1g005368m.g Citrus sinensis orange1.1g005368m.g I 0.711
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.711
POPTR_0001s13110 Populus trichocarpa POPTR_0001s13110 I 0.711
estExt_Genewise1.C_2800001 Physcomitrella patens estExt_Genewise1.C_2800001 I 0.711
TRIUR3_28704 Triticum urartu TRIUR3_28704 I 0.708
F775_21871 Aegilops tauschii F775_21871 I 0.708
PK02218.1 Cannabis sativa PK02218.1 I 0.708
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.708
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.708
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.708
Ca_05681 Cicer arietinum Ca_05681 I 0.708
TRAES3BF007300580CFD_g Triticum aestivum TRAES3BF007300580CFD_g I 0.708
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.708
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I 0.708
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.704
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.704
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.704
Sb08g014320 Sorghum bicolor Sb08g014320 I 0.704
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.704
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.704
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.704
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.704
PK04762.1 Cannabis sativa PK04762.1 I 0.704
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I 0.704
Bra010048 Brassica rapa Bra010048 I 0.704
Bo3g108130 Brassica oleracea Bo3g108130 I 0.704
TCM_008374 Theobroma cacao TCM_008374 I 0.704
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.704
PK16974.1 Cannabis sativa PK16974.1 I 0.704
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.704
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.704
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.704
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.704
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.704
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.704
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.704
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.704
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.704
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.704
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.704
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.704
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.704
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.704
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.704
mgf006511m Mimulus guttatus mgf006511m I 0.704
mgf015308m Mimulus guttatus mgf015308m I 0.704
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.704
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.704
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.704
MDP0000258032 Malus domestica MDP0000258032 I 0.704
MDP0000310875 Malus domestica MDP0000310875 I 0.704
Gorai.007G131900 Gossypium raimondii Gorai.007G131900 I 0.704
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.704
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.704
MLOC_65945 Hordeum vulgare MLOC_65945 I 0.701
30128.m008545 Ricinus communis 30128.m008545 I 0.701
gw1.341.65.1 Physcomitrella patens gw1.341.65.1 I 0.701
TCM_027113 Theobroma cacao TCM_027113 I 0.701
Pavir.Eb00045 Panicum virgatum Pavir.Eb00045 I 0.701
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.700
OLONG_013033 Oryza longistaminata OLONG_013033 I 0.700