evm.TU.supercontig_9.161 (Carica papaya)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 evm.TU.supercontig_9.161 T023159_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_9.161 B3 138 239

Links

Other B3 family TFs
Other Carica papaya TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene27792-v1.0-hybrid Fragaria vesca gene27792-v1.0-hybrid N 0.802
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I 0.779
OB02G28170 Oryza brachyantha OB02G28170 I 0.779
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.779
Si016562m.g Setaria italica Si016562m.g I 0.779
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.779
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.779
GRMZM2G137413 Zea mays GRMZM2G137413 I 0.768
PDK_20s1651081g001 Phoenix dactylifera PDK_20s1651081g001 I 0.767
Ciclev10003317m.g Citrus clementina Ciclev10003317m.g I 0.760
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.758
PK12669.1 Cannabis sativa PK12669.1 I 0.758
BRADI3G45880 Brachypodium distachyon BRADI3G45880 I 0.758
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.758
Ciclev10019257m.g Citrus clementina Ciclev10019257m.g I 0.753
orange1.1g005060m.g Citrus sinensis orange1.1g005060m.g I 0.753
Si009558m.g Setaria italica Si009558m.g I 0.750
Pavir.Ga01750 Panicum virgatum Pavir.Ga01750 I 0.750
Pavir.Gb01617 Panicum virgatum Pavir.Gb01617 I 0.750
cassava32762.m1 Manihot esculenta cassava32762.m1 I 0.750
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.747
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.747
GSMUA_Achr6G29070_001 Musa acuminata GSMUA_Achr6G29070_001 I 0.747
BRADI5G10950 Brachypodium distachyon BRADI5G10950 I 0.742
TCM_027113 Theobroma cacao TCM_027113 I 0.742
Traes_2BL_1AED96909 Triticum aestivum Traes_2BL_1AED96909 I 0.742
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.742
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.742
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.742
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.742
BGIOSGA016467 Oryza indica BGIOSGA016467 I 0.740
Sb06g017490 Sorghum bicolor Sb06g017490 I 0.740
ONIVA04G11850 Oryza nivara ONIVA04G11850 I 0.740
OGLUM04G13380 Oryza glumaepatula OGLUM04G13380 I 0.740
GRMZM2G017187 Zea mays GRMZM2G017187 I 0.740
ORGLA04G0107000 Oryza glaberrima ORGLA04G0107000 I 0.740
OMERI04G12260 Oryza meridionalis OMERI04G12260 I 0.740
ARF9 Oryza sativa OS04G0442000 I 0.740
ORUFI04G14900 Oryza rufipogon ORUFI04G14900 I 0.740
GSMUA_Achr10G16170_001 Musa acuminata GSMUA_Achr10G16170_001 I 0.737
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.737
TCM_004526 Theobroma cacao TCM_004526 I 0.735
VIT_07s0104g01230 Vitis vinifera VIT_07s0104g01230 I 0.735
OB04G20880 Oryza brachyantha OB04G20880 I 0.732
MDP0000929655 Malus domestica MDP0000929655 I 0.732
Aquca_003_00899 Aquilegia coerulea Aquca_003_00899 I 0.732
SELMODRAFT_437944 Selaginella moellendorffii SELMODRAFT_437944 I 0.729
SELMODRAFT_438973 Selaginella moellendorffii SELMODRAFT_438973 I 0.729
PK04762.1 Cannabis sativa PK04762.1 I 0.724
GSMUA_Achr6G12780_001 Musa acuminata GSMUA_Achr6G12780_001 I 0.719
Solyc12g006350.1 Solanum lycopersicum Solyc12g006350.1 I 0.717
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.717
OB05G33320 Oryza brachyantha OB05G33320 I 0.716
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.716
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.716
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.716
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.716
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.716
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.716
Si000340m.g Setaria italica Si000340m.g I 0.716
Cla019614 Citrullus lanatus Cla019614 I 0.716
Ca_05681 Cicer arietinum Ca_05681 I 0.716
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.714
PRUPE_ppa022314mg Prunus persica PRUPE_ppa022314mg I 0.714
cassava44132.valid.m1 Manihot esculenta cassava44132.valid.m1 I 0.711
cassava47296.m1 Manihot esculenta cassava47296.m1 I 0.711
cassava47298.m1 Manihot esculenta cassava47298.m1 I 0.711
cassava44131.valid.m1 Manihot esculenta cassava44131.valid.m1 I 0.711
SapurV1A.0340s0160 Salix purpurea SapurV1A.0340s0160 I 0.711
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.711
AMTR_s00016p00168950 Amborella trichopoda AMTR_s00016p00168950 I 0.711
cassava47299.m1 Manihot esculenta cassava47299.m1 I 0.711
cassava47297.m1 Manihot esculenta cassava47297.m1 I 0.711
Gorai.007G044900 Gossypium raimondii Gorai.007G044900 I 0.711
cassava47301.m1 Manihot esculenta cassava47301.m1 I 0.711
cassava47300.m1 Manihot esculenta cassava47300.m1 I 0.711
OLONG_013033 Oryza longistaminata OLONG_013033 I 0.711
PDK_20s1428911g001 Phoenix dactylifera PDK_20s1428911g001 I 0.707
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.707
Si021216m.g Setaria italica Si021216m.g I 0.705
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.705
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.705
mgf020855m Mimulus guttatus mgf020855m I 0.705
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.705
MDP0000123466 Malus domestica MDP0000123466 I 0.704
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.704
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.704
Pm019941 Prunus mume Pm019941 I 0.704
PDK_20s1869091g001 Phoenix dactylifera PDK_20s1869091g001 I 0.701
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.701
estExt_Genewise1.C_2800001 Physcomitrella patens estExt_Genewise1.C_2800001 I 0.701
POPTR_0003s16210 Populus trichocarpa POPTR_0003s16210 I 0.701
SapurV1A.0499s0060 Salix purpurea SapurV1A.0499s0060 I 0.701
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.700