Cla016841 (Citrullus lanatus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cla016841 T070036_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV

BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.825 0.524
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV

BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.825 0.524
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.808 0.508
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.808 0.508
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN

NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.802 0.524
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG

CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.802 0.524
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla016841 bZIP 23 85

Links

Other bZIP family TFs
Other Citrullus lanatus TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.886
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.886
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.882
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.876
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.876
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.876
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.876
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.876
MDP0000205823 Malus domestica MDP0000205823 I 0.872
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.867
PK07533.1 Cannabis sativa PK07533.1 I 0.863
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.863
MDP0000239026 Malus domestica MDP0000239026 I 0.859
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.857
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.857
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.857
30131.m007078 Ricinus communis 30131.m007078 I 0.857
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.856
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.843
mgf018581m Mimulus guttatus mgf018581m I 0.843
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.840
mgf003466m Mimulus guttatus mgf003466m I 0.840
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.837
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.835
MDP0000863909 Malus domestica MDP0000863909 I 0.831
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N 0.830
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.830
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.830
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N 0.830
Lus10001347.g Linum usitatissimum Lus10001347.g N 0.829
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.827
mgf017392m Mimulus guttatus mgf017392m I 0.827
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.827
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.827
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I 0.825
Bo6g079450 Brassica oleracea Bo6g079450 I 0.825
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.825
Cla016748 Citrullus lanatus Cla016748 I 0.825
Bra039631 Brassica rapa Bra039631 I 0.825
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.825
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.825
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.825
BZIP53 Arabidopsis thaliana AT3G62420 D 0.825
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.825
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.825
Bra003500 Brassica rapa Bra003500 I 0.825
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.825
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.825
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.823
Pm015434 Prunus mume Pm015434 I 0.822
Gorai.002G126500 Gossypium raimondii Gorai.002G126500 I 0.822
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.822
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.822
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.822
Bra007679 Brassica rapa Bra007679 I 0.822
Bo8g097830 Brassica oleracea Bo8g097830 I 0.822
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.821
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.821
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.821
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.821
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.820
Lus10024279.g Linum usitatissimum Lus10024279.g N 0.820
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.820
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.819
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.819
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.819
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.818
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.818
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.818
Pm002353 Prunus mume Pm002353 I 0.818
cassava1498.valid.m1 Manihot esculenta cassava1498.valid.m1 N 0.818
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.817
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.817
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.817
TCM_000835 Theobroma cacao TCM_000835 I 0.817
MDP0000891108 Malus domestica MDP0000891108 I 0.817
MDP0000183562 Malus domestica MDP0000183562 I 0.817
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.816
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.815
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.814
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.814
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.814
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.814
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.813
Cla022814 Citrullus lanatus Cla022814 N 0.813
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.813
Gorai.012G155000 Gossypium raimondii Gorai.012G155000 N 0.812
Ca_09362 Cicer arietinum Ca_09362 I 0.812
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.812
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.812
Cucsa.248080 Cucumis sativus Cucsa.248080 N 0.811
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.811
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.811
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.811
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.811
Eucgr.F01867 Eucalyptus grandis Eucgr.F01867 N 0.810
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.810
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.810
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.809
Cla020641 Citrullus lanatus Cla020641 I 0.809
Bra006324 Brassica rapa Bra006324 I 0.809
Bo3g010620 Brassica oleracea Bo3g010620 I 0.809
Bo3g010750 Brassica oleracea Bo3g010750 I 0.809
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I 0.808
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.808
cassava42526.valid.m1 Manihot esculenta cassava42526.valid.m1 N 0.808
30076.m004659 Ricinus communis 30076.m004659 I 0.808
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.808
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.807
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.807
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.807
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.807
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.807
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.807
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.807
30138.m003866 Ricinus communis 30138.m003866 I 0.807
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.807
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.807
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.807
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.807
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.806
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.806
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.806
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.806
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.806
AMTR_s00014p00097990 Amborella trichopoda AMTR_s00014p00097990 N 0.805
MDP0000738631 Malus domestica MDP0000738631 I 0.805
Cla005975 Citrullus lanatus Cla005975 I 0.805
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.804
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.804
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.803
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.803
mgf004063m Mimulus guttatus mgf004063m N 0.803
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.802
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.802
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.802
OS02G0728001 Oryza sativa OS02G0728001 D 0.802
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.802
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.802
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.802
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.802
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.802
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.802
OBART02G31030 Oryza barthii OBART02G31030 I 0.802
Cucsa.043170 Cucumis sativus Cucsa.043170 N 0.801
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.800
Bra023540 Brassica rapa Bra023540 I 0.800
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.800
Bo2g012800 Brassica oleracea Bo2g012800 I 0.800
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.800
Bra008670 Brassica rapa Bra008670 I 0.800
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.800
Bo9g163740 Brassica oleracea Bo9g163740 I 0.800
Ca_03512 Cicer arietinum Ca_03512 I 0.800
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.800
PK01815.1 Cannabis sativa PK01815.1 N 0.799
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.798
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.798
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.797
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.796
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.795
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I 0.795
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.795
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.795
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.794
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.794
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N 0.794
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.793
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.793
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.793
Si019897m.g Setaria italica Si019897m.g I 0.792
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.791
mgf022473m Mimulus guttatus mgf022473m N 0.790
PK03779.1 Cannabis sativa PK03779.1 I 0.790
Ca_17416 Cicer arietinum Ca_17416 I 0.790
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.789
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N 0.789
Ca_01004 Cicer arietinum Ca_01004 I 0.789
Solyc03g033730.1 Solanum lycopersicum Solyc03g033730.1 I 0.789
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.788
Si023562m.g Setaria italica Si023562m.g N 0.788
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.786
PK06492.1 Cannabis sativa PK06492.1 N 0.786
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.785
Aquca_013_00256 Aquilegia coerulea Aquca_013_00256 N 0.785
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N 0.784
PGSC0003DMG400005476 Solanum tuberosum PGSC0003DMG400005476 N 0.784
28976.m000155 Ricinus communis 28976.m000155 N 0.783
TCM_004807 Theobroma cacao TCM_004807 I 0.783
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.782
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.782