Cagra.6845s0027 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.6845s0027 T071530_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.866 0.823
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.866 0.823
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.795 0.484
OS02G0728001
M01826_2.00 		Oryza sativa
NHCACGTGKNN
NNMCACGTGDN		 PBM
Weirauch et al.(2014)
pTH8334 		0.786 0.629
OS02G0728001
M01827_2.00 		Oryza sativa
WSACGTGG
CCACGTSW		 PBM
Weirauch et al.(2014)
pTH8737 		0.786 0.629
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.6845s0027.1.p bZIP 72 133

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g012800 Brassica oleracea Bo2g012800 I 0.885
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.885
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.885
Bra023540 Brassica rapa Bra023540 I 0.876
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.876
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.876
Bo9g163740 Brassica oleracea Bo9g163740 I 0.873
Bra008670 Brassica rapa Bra008670 I 0.873
Cla016748 Citrullus lanatus Cla016748 I 0.869
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.869
mgf017392m Mimulus guttatus mgf017392m I 0.867
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.866
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.866
Bo3g010620 Brassica oleracea Bo3g010620 I 0.866
Bra006324 Brassica rapa Bra006324 I 0.856
Bo3g010750 Brassica oleracea Bo3g010750 I 0.856
Pm015434 Prunus mume Pm015434 I 0.852
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.852
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.852
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.852
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.852
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.850
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.850
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.844
MDP0000863909 Malus domestica MDP0000863909 I 0.843
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.837
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.837
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.837
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.837
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.836
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.836
MDP0000891108 Malus domestica MDP0000891108 I 0.834
MDP0000183562 Malus domestica MDP0000183562 I 0.834
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.829
Cla020641 Citrullus lanatus Cla020641 I 0.829
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.824
30138.m003866 Ricinus communis 30138.m003866 I 0.823
Cla005975 Citrullus lanatus Cla005975 I 0.823
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.823
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.823
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.823
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.823
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.823
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.823
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.823
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.823
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.823
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.820
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.820
Ca_09362 Cicer arietinum Ca_09362 I 0.819
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.819
Ca_17416 Cicer arietinum Ca_17416 I 0.818
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.818
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.818
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.817
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.817
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.817
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.817
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.817
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.817
30131.m007078 Ricinus communis 30131.m007078 I 0.817
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.817
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.816
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.816
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.814
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.813
MDP0000239026 Malus domestica MDP0000239026 I 0.813
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.811
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.810
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.809
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.809
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.808
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.808
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.808
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.807
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.807
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.804
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.804
Cla016841 Citrullus lanatus Cla016841 I 0.804
PK07533.1 Cannabis sativa PK07533.1 I 0.804
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.801
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.799
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.798
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.798
MDP0000891899 Malus domestica MDP0000891899 I 0.798
mgf003466m Mimulus guttatus mgf003466m I 0.797
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.797
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.797
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.797
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.797
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.797
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.796
Pm002353 Prunus mume Pm002353 I 0.796
TCM_000835 Theobroma cacao TCM_000835 I 0.796
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.796
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.795
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.795
OS02G0266800 Oryza sativa OS02G0266800 D 0.795
OBART02G05680 Oryza barthii OBART02G05680 I 0.795
Si017778m.g Setaria italica Si017778m.g I 0.795
OBART02G11580 Oryza barthii OBART02G11580 I 0.795
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.795
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.795
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.795
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.795
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.795
OS02G0175100 Oryza sativa OS02G0175100 I 0.795
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.795
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.795
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.795
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.795
MDP0000205823 Malus domestica MDP0000205823 I 0.795
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.795
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.795
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.795
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.795
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.795
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.795
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.794
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.794
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.794
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.793
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.793
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.793
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.793
Si019897m.g Setaria italica Si019897m.g I 0.791
mgf021986m Mimulus guttatus mgf021986m I 0.791
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I 0.790
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.789
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.789
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.788
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.788
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.788
Si031238m.g Setaria italica Si031238m.g I 0.788
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.788
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.787
mgf007535m Mimulus guttatus mgf007535m I 0.787
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.787
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.787
mgf013074m Mimulus guttatus mgf013074m I 0.787
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.786
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.786
OBART02G31030 Oryza barthii OBART02G31030 I 0.786
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.786
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.786
OS02G0728001 Oryza sativa OS02G0728001 D 0.786
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.786
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.786
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.786
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.786
PDK_20s1520551g003 Phoenix dactylifera PDK_20s1520551g003 I 0.785
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.785
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.785
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N 0.784
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N 0.784
mgf018581m Mimulus guttatus mgf018581m I 0.784
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.783
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.783
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.782
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.782