TCM_014903 (Theobroma cacao)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TCM_014903 T130179_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.780 0.804
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.780 0.783
PK09091.1
M01200_2.00 		Cannabis sativa
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10176 		0.760 0.652
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY22851 C2H2 ZF 199 221
EOY22851 C2H2 ZF 257 279

Links

Other C2H2 ZF family TFs
Other Theobroma cacao TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.001G049300 Gossypium raimondii Gorai.001G049300 I 0.811
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.786
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.781
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.781
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.780
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.780
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.780
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.780
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.780
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.780
ZAT9 Arabidopsis thaliana AT3G60580 D 0.780
ZAT4 Arabidopsis thaliana AT2G45120 D 0.780
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.780
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.780
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.780
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.780
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.775
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.775
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.775
Ca_23672 Cicer arietinum Ca_23672 I 0.770
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.770
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.770
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.770
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.770
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.770
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.769
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.766
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.765
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.765
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I 0.764
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I 0.764
cassava21316.m1 Manihot esculenta cassava21316.m1 I 0.764
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I 0.763
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.763
PK09091.1 Cannabis sativa PK09091.1 D 0.760
Gorai.010G202400 Gossypium raimondii Gorai.010G202400 I 0.759
Eucgr.A01232 Eucalyptus grandis Eucgr.A01232 I 0.759
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I 0.758
30147.m014242 Ricinus communis 30147.m014242 I 0.758
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.757
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.757
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.757
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.757
ZAT1 Arabidopsis thaliana AT1G02030 D 0.757
Bo4g104940 Brassica oleracea Bo4g104940 I 0.756
Bo4g195370 Brassica oleracea Bo4g195370 I 0.756
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.756
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I 0.756
Bo3g037560 Brassica oleracea Bo3g037560 I 0.756
Bo6g077190 Brassica oleracea Bo6g077190 I 0.756
Bra014483 Brassica rapa Bra014483 I 0.756
30174.m008818 Ricinus communis 30174.m008818 I 0.756
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.756
Bra040325 Brassica rapa Bra040325 I 0.756
Bra007545 Brassica rapa Bra007545 I 0.756
Bra000372 Brassica rapa Bra000372 I 0.756
Bra003422 Brassica rapa Bra003422 I 0.756
Bo8g095300 Brassica oleracea Bo8g095300 I 0.756