PK05257.1 (Cannabis sativa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PK05257.1 T144887_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK05257.1 C2H2 ZF 285 308
PK05257.1 C2H2 ZF 307 333

Links

Other C2H2 ZF family TFs
Other Cannabis sativa TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.797
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.797
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.797
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.797
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.797
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.797
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.797
Pm001374 Prunus mume Pm001374 N 0.797
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.797
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.797
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.797
TCM_041441 Theobroma cacao TCM_041441 N 0.797
Ca_07051 Cicer arietinum Ca_07051 N 0.797
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.797
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.797
30055.m001542 Ricinus communis 30055.m001542 N 0.797
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.797
MDP0000131949 Malus domestica MDP0000131949 N 0.797
MDP0000300013 Malus domestica MDP0000300013 N 0.797
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.797
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.797
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.797
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.797
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.797
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.797
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.797
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N 0.795
OMERI01G34920 Oryza meridionalis OMERI01G34920 N 0.795
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N 0.795
ONIVA04G25710 Oryza nivara ONIVA04G25710 N 0.795
OS01G0859100 Oryza sativa OS01G0859100 N 0.795
LPERR01G32600 Leersia perrieri LPERR01G32600 N 0.795
BGIOSGA000452 Oryza indica BGIOSGA000452 N 0.795
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N 0.795
F775_11193 Aegilops tauschii F775_11193 N 0.795
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N 0.795
OBART01G37960 Oryza barthii OBART01G37960 N 0.795
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N 0.795
OPUNC01G36780 Oryza punctata OPUNC01G36780 N 0.795
Ca_16482 Cicer arietinum Ca_16482 N 0.792
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.791
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.791
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.791
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.791
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.791
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.791
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.782
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.782
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.782
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.782
OS08G0504000 Oryza sativa OS08G0504000 N 0.782
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.782
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.782
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.782
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.782
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.782
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.782
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.782
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.782
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.782
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.782
Si013819m.g Setaria italica Si013819m.g N 0.782
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.782
OS09G0485600 Oryza sativa OS09G0485600 N 0.782
Si029897m.g Setaria italica Si029897m.g N 0.782
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.782
OB08G26650 Oryza brachyantha OB08G26650 N 0.782
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.782
F775_14972 Aegilops tauschii F775_14972 N 0.782
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.782
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.782
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.782
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.782
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.782
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.782
OBART08G19670 Oryza barthii OBART08G19670 N 0.782
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.782
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.782
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.782
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.782
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.782
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.782
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.782
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.781
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.781
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.781
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.781
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.781
WIP3 Arabidopsis thaliana AT1G08290 N 0.779
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.779
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.779
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.779
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.779
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.778
Cla000184 Citrullus lanatus Cla000184 N 0.778
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.778
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.776
Bo5g015200 Brassica oleracea Bo5g015200 N 0.776
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.776
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.776
Bra019822 Brassica rapa Bra019822 N 0.776
WIP6 Arabidopsis thaliana AT1G13290 N 0.776
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.776
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.773
Cla015481 Citrullus lanatus Cla015481 N 0.772
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.772
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.772
30061.m000294 Ricinus communis 30061.m000294 N 0.772
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.772
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.772
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.772
mgf022319m Mimulus guttatus mgf022319m N 0.772
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.772
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.772
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.772
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.772
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.772
TCM_005892 Theobroma cacao TCM_005892 N 0.772
Bo5g081360 Brassica oleracea Bo5g081360 N 0.772
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.772
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.772
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.772
Sb09g021850 Sorghum bicolor Sb09g021850 N 0.771
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.771
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.771
Pavir.J11927 Panicum virgatum Pavir.J11927 N 0.771
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.771
Si022296m.g Setaria italica Si022296m.g N 0.771
OB05G26090 Oryza brachyantha OB05G26090 N 0.771
Bo5g008880 Brassica oleracea Bo5g008880 N 0.769
Bo8g112550 Brassica oleracea Bo8g112550 N 0.769
Bra031621 Brassica rapa Bra031621 N 0.769
Bra018638 Brassica rapa Bra018638 N 0.769
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.768
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.768
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.768
mgf022981m Mimulus guttatus mgf022981m N 0.768
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.768
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.768
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.767
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.767
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.767
MDP0000144266 Malus domestica MDP0000144266 N 0.766
MDP0000142494 Malus domestica MDP0000142494 N 0.765
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.762
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.761
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.761
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.761
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.761
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.761
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.761
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.761
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.761
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.761
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.761
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.761
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.761
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.761
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.761
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.761
OS09G0307400 Oryza sativa OS09G0307400 N 0.761
Si030360m.g Setaria italica Si030360m.g N 0.761
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.761
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.761
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.761
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.761
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.758
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.758
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.758
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.758
TCM_034881 Theobroma cacao TCM_034881 N 0.758
TCM_040610 Theobroma cacao TCM_040610 N 0.758
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.758
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.758
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.758
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.758
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.758
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.758
Ca_27078 Cicer arietinum Ca_27078 N 0.758
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.758
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.758
TT1 Vitis vinifera VIT_18s0001g05860 N 0.758
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.758
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.758
29908.m006047 Ricinus communis 29908.m006047 N 0.758
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.758
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.758
30169.m006417 Ricinus communis 30169.m006417 N 0.758
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.758
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.756
MDP0000573922 Malus domestica MDP0000573922 N 0.756
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.756