MDP0000573922 (Malus domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MDP0000573922 T143230_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000573922 C2H2 ZF 44 65
MDP0000573922 C2H2 ZF 64 90

Links

Other C2H2 ZF family TFs
Other Malus domestica TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.825
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.825
TCM_034881 Theobroma cacao TCM_034881 N 0.825
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.825
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.818
29908.m006047 Ricinus communis 29908.m006047 N 0.818
TT1 Vitis vinifera VIT_18s0001g05860 N 0.818
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.815
30061.m000294 Ricinus communis 30061.m000294 N 0.811
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.811
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.805
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.805
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.805
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.805
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.805
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.805
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.805
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.805
TCM_005892 Theobroma cacao TCM_005892 N 0.805
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.801
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.801
Cla000184 Citrullus lanatus Cla000184 N 0.799
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.799
MDP0000142494 Malus domestica MDP0000142494 N 0.796
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.796
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.796
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.796
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.796
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.796
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.795
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.795
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.795
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.795
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.795
Ca_27078 Cicer arietinum Ca_27078 N 0.795
MDP0000144266 Malus domestica MDP0000144266 N 0.794
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.791
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.789
mgf022319m Mimulus guttatus mgf022319m N 0.787
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.786
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.786
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.786
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.786
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.786
TCM_041441 Theobroma cacao TCM_041441 N 0.786
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.786
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.786
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.786
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.786
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.786
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.786
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.786
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.786
MDP0000300013 Malus domestica MDP0000300013 N 0.786
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.786
MDP0000131949 Malus domestica MDP0000131949 N 0.786
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.786
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.786
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.786
30055.m001542 Ricinus communis 30055.m001542 N 0.786
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.786
Pm001374 Prunus mume Pm001374 N 0.786
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.786
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.783
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.781
mgf022981m Mimulus guttatus mgf022981m N 0.781
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.781
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.781
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.781
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.781
Cla015481 Citrullus lanatus Cla015481 N 0.781
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.781
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.781
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.780
Bra031621 Brassica rapa Bra031621 N 0.780
Bo5g008880 Brassica oleracea Bo5g008880 N 0.780
Bra018638 Brassica rapa Bra018638 N 0.780
Bo8g112550 Brassica oleracea Bo8g112550 N 0.780
Ca_16482 Cicer arietinum Ca_16482 N 0.780
Pm000471 Prunus mume Pm000471 N 0.775
27810.m000651 Ricinus communis 27810.m000651 N 0.775
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.775
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.775
Pm025853 Prunus mume Pm025853 N 0.775
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.775
MDP0000601705 Malus domestica MDP0000601705 N 0.775
MDP0000580545 Malus domestica MDP0000580545 N 0.775
MDP0000403797 Malus domestica MDP0000403797 N 0.775
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.775
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.775
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.775
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.775
PK03705.1 Cannabis sativa PK03705.1 N 0.775
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.775
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.775
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.775
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.775
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.775
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.775
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.775
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.775
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.775
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.775
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.775
Cla008187 Citrullus lanatus Cla008187 N 0.775
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.775
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.775
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.775
Ca_07269 Cicer arietinum Ca_07269 N 0.775
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.775
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.775
Bra014612 Brassica rapa Bra014612 N 0.775
Bra007346 Brassica rapa Bra007346 N 0.775
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.775
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.775
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.775
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.775
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.775
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.775
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.775
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.775
TCM_024788 Theobroma cacao TCM_024788 N 0.775
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.775
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.775
Bo4g111000 Brassica oleracea Bo4g111000 N 0.775
Bo5g081360 Brassica oleracea Bo5g081360 N 0.775
Bo6g073120 Brassica oleracea Bo6g073120 N 0.775
NTT Vitis vinifera VIT_08s0007g08070 N 0.775
WIP2 Arabidopsis thaliana AT3G57670 N 0.775
Bo8g092070 Brassica oleracea Bo8g092070 N 0.775
Bra003295 Brassica rapa Bra003295 N 0.775
OBART08G19670 Oryza barthii OBART08G19670 N 0.771
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.771
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.771
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.771
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.771
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.771
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.771
OB08G26650 Oryza brachyantha OB08G26650 N 0.771
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.771
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.771
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.771
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.771
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.771
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.771
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.771
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.771
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.771
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.771
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.771
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.771
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.771
OS09G0485600 Oryza sativa OS09G0485600 N 0.771
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.771
OS08G0504000 Oryza sativa OS08G0504000 N 0.771
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.771
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.771
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.771
Si013819m.g Setaria italica Si013819m.g N 0.771
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.770
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.770
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.770
WIP3 Arabidopsis thaliana AT1G08290 N 0.770
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.770
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.770
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.766
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.766
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.766
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.766
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.766
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.766
TCM_040610 Theobroma cacao TCM_040610 N 0.766
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.766
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.766
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.766
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.766
OBART06G20890 Oryza barthii OBART06G20890 N 0.766
Ca_21713 Cicer arietinum Ca_21713 N 0.766
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.766
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.766
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.766
30169.m006417 Ricinus communis 30169.m006417 N 0.766
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.766
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.766
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.765
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.765
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.765
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.765
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.765
Si029897m.g Setaria italica Si029897m.g N 0.765
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.765
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.765
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.765
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.765
F775_14972 Aegilops tauschii F775_14972 N 0.765
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.762
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.762
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.762
Ca_07051 Cicer arietinum Ca_07051 N 0.762
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.762
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.762
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.762
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.762
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.761
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.758
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.756
PK05257.1 Cannabis sativa PK05257.1 N 0.756
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.756