Ocbimv22027544m.g (Octopus bimaculoides)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 Ocbimv22027544m.g T198180_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gcm
M03764_2.00
Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV

BATGCGGGYVBBRCCCGCATD
SELEX
Nitta et al.(2015)
gcm_1
0.714 0.714
gcm
M03765_2.00
Drosophila melanogaster
VATGCKGGYRCCMGCATV

BATGCKGGYRCCMGCATB
SELEX
Nitta et al.(2015)
gcm_2
0.714 0.714
gcm
M03766_2.00
Drosophila melanogaster
YATGCGGGTACCAGCATV

BATGCTGGTACCCGCATR
SELEX
Nitta et al.(2015)
gcm_3
0.714 0.714
gcm
M10605_2.00
Drosophila melanogaster
NDNATGCGGGYNB

VNRCCCGCATNHN
Transfac
Matys et al.(2006)
I$GCM_01
0.714 0.714
gcm2
M02026_2.00
Drosophila melanogaster
ATGCGGGY

RCCCGCAT
PBM
Weirauch et al.(2014)
pTH8361
0.686 0.686
gcm2
M03767_2.00
Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN

NATGCGGGYNNNRCCCGCATN
SELEX
Nitta et al.(2015)
gcm2_1
0.686 0.686
gcm2
M03768_2.00
Drosophila melanogaster
BATGCKGGTACCMGCATV

BATGCKGGTACCMGCATV
SELEX
Nitta et al.(2015)
gcm2_2
0.686 0.686
ENSTRUG00000003586
M02025_2.00
Takifugu rubripes
NRTRNGGGYN

NRCCCNYAYN
PBM
Weirauch et al.(2014)
pTH9357
0.671 0.671
GCM2
M03067_2.00
Homo sapiens
NATGCGGGYD

HRCCCGCATN
SELEX
Jolma et al.(2013)
GCM2_1
0.671 0.671
GCM2
M04881_2.00
Homo sapiens
RTGCGGGYN

NRCCCGCAY
SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX
0.671 0.671
GCM2
M10602_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMB_Q2
0.671 0.671
GCM2
M04882_2.00
Homo sapiens
ATRHKGGYN

NRCCMDYAT
SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX
0.671 0.671
gcm2
M02024_2.00
Tetraodon nigroviridis
ATRCGGGY

RCCCGYAT
PBM
Weirauch et al.(2014)
pTH9386
0.664 0.664
GCM2
M02023_2.00
Taeniopygia guttata
NRTRHKGGYN

NRCCMDYAYN
PBM
Weirauch et al.(2014)
pTH9341
0.657 0.657
GCM1
M02021_2.00
Meleagris gallopavo
VTVNKGGYNN

NNRCCMNBAB
PBM
Weirauch et al.(2014)
pTH8653
0.650 0.650
XP_004449939.1
M02027_2.00
Dasypus novemcinctus
RTRSGGGY

RCCCSYAY
PBM
Weirauch et al.(2014)
pTH9259
0.643 0.643
Gcm1
M00168_2.00
Mus musculus
NVTRVGGGY

RCCCBYABN
PBM
Badis et al.(2009)
Gcm1_3732
0.621 0.621
Gcm1
M02022_2.00
Rattus norvegicus
NNRTRVGGGY

RCCCBYAYNN
PBM
Weirauch et al.(2014)
pTH9283
0.621 0.621
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22027544m.p GCM 51 191

Links

Other GCM family TFs
Other Octopus bimaculoides TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.743
AAEL000623 Aedes aegypti AAEL000623 I 0.714
AAEL000631 Aedes aegypti AAEL000631 I 0.664
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.664
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.629
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.659
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.659
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.657
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.664
AALB008013 Anopheles albimanus AALB008013 I 0.721
AALB008012 Anopheles albimanus AALB008012 I 0.671
AARA011980 Anopheles arabiensis AARA011980 I 0.729
AARA011979 Anopheles arabiensis AARA011979 I 0.650
AATE020589 Anopheles atroparvus AATE020589 I 0.664
AATE008476 Anopheles atroparvus AATE008476 I 0.714
ACHR004082 Anopheles christyi ACHR004082 I 0.643
ACHR001414 Anopheles christyi ACHR001414 I 0.743
ACOM031025 Anopheles coluzzii ACOM031025 I 0.713
ACOM031032 Anopheles coluzzii ACOM031032 I 0.650
ACUA009622 Anopheles culicifacies ACUA009622 I 0.736
ACUA018162 Anopheles culicifacies ACUA018162 I 0.643
ADAC002327 Anopheles darlingi ADAC002327 I 0.714
ADIR000711 Anopheles dirus ADIR000711 I 0.743
ADIR000710 Anopheles dirus ADIR000710 I 0.650
AEPI007160 Anopheles epiroticus AEPI007160 I 0.743
AEPI007161 Anopheles epiroticus AEPI007161 I 0.650
AFAF005680 Anopheles farauti AFAF005680 I 0.736
AFAF000663 Anopheles farauti AFAF000663 I 0.650
AFUN009836 Anopheles funestus AFUN009836 I 0.643
AFUN009837 Anopheles funestus AFUN009837 I 0.736
AGAP007783 Anopheles gambiae AGAP007783 I 0.736
AGAP007782 Anopheles gambiae AGAP007782 I 0.650
AMAM005757 Anopheles maculatus AMAM005757 I 0.688
AMAM003661 Anopheles maculatus AMAM003661 I 0.736
AMEC020313 Anopheles melas AMEC020313 I 0.721
AMEM005966 Anopheles merus AMEM005966 I 0.713
AMEM008520 Anopheles merus AMEM008520 I 0.650
AMIN006367 Anopheles minimus AMIN006367 I 0.643
AMIN006368 Anopheles minimus AMIN006368 I 0.736
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.736
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.650
ASIS002985 Anopheles sinensis ASIS002985 I 0.721
ASIS021139 Anopheles sinensis ASIS021139 I 0.671
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.736
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.643
GB45031 Apis mellifera GB45031 I 0.757
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.657
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.657
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.664
ACEP23384 Atta cephalotes ACEP23384 I 0.757
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.750
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.750
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.623
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.696
GCM1 Bos taurus ENSBTAG00000008148 I 0.623
GCM2 Bos taurus ENSBTAG00000018787 I 0.686
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.700
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.643
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.657
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.664
Aan_R001550 Calypte anna Aan_R001550 I 0.664
Aan_R001196 Calypte anna Aan_R001196 I 0.643
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.750
GCM2 Canis familiaris ENSCAFG00000009747 I 0.671
GCM1 Canis familiaris ENSCAFG00000002273 I 0.630
CapteG133139 Capitella teleta CapteG133139 I 0.707
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.629
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.688
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.664
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.671
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.671
CLEC013329 Cimex lectularius CLEC013329 I 0.743
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.786
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.714
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.671
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.671
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.714
KGM_05743 Danaus plexippus KGM_05743 I 0.750
gcm2 Danio rerio ENSDARG00000045413 I 0.671
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.714
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.681
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.643
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.643
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.771
DILT_0000717101 Diphyllobothrium latum DILT_0000717101 I 0.614
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.614
GF21907 Drosophila ananassae FBgn0098907 I 0.714
GF22779 Drosophila ananassae FBgn0099773 I 0.686
GG10041 Drosophila erecta FBgn0102353 I 0.686
GG24019 Drosophila erecta FBgn0116158 I 0.721
GH10675 Drosophila grimshawi FBgn0118156 I 0.693
GH11056 Drosophila grimshawi FBgn0118537 I 0.700
gcm Drosophila melanogaster FBgn0014179 D 0.714
gcm2 Drosophila melanogaster FBgn0019809 D 0.686
GI17574 Drosophila mojavensis FBgn0140318 I 0.700
GI11073 Drosophila mojavensis FBgn0133835 I 0.693
GL19218 Drosophila persimilis FBgn0156817 I 0.721
GL18919 Drosophila persimilis FBgn0156520 I 0.679
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.679
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.721
GM17569 Drosophila sechellia FBgn0172477 I 0.686
GM12386 Drosophila sechellia FBgn0167323 I 0.714
GD22349 Drosophila simulans FBgn0193756 I 0.686
GJ18313 Drosophila virilis FBgn0205472 I 0.693
GJ17916 Drosophila virilis FBgn0205084 I 0.700
GK23867 Drosophila willistoni FBgn0225829 I 0.664
GK23810 Drosophila willistoni FBgn0225772 I 0.707
GE10457 Drosophila yakuba FBgn0228318 I 0.721
GE18856 Drosophila yakuba FBgn0236239 I 0.693
GCM2 Echinops telfairi ENSETEG00000012473 I 0.661
GCM1 Equus caballus ENSECAG00000014228 I 0.623
GCM2 Equus caballus ENSECAG00000017632 I 0.671
GCM1 Felis catus ENSFCAG00000009490 I 0.630
GCM2 Felis catus ENSFCAG00000001608 I 0.671
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.657
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.659
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.671
GCM1 Gallus gallus ENSGALG00000016316 I 0.650
GCM2 Gallus gallus ENSGALG00000012768 I 0.650
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.674
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.657
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.643
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.671
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.750
HMEL005671 Heliconius melpomene HMEL005671 I 0.750
GCM2 Homo sapiens ENSG00000124827 D 0.671
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.667
ISCW022914 Ixodes scapularis ISCW022914 I 0.743
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.667
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.645
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.681
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.757
LotgiG112320 Lottia gigantea LotgiG112320 I 0.771
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.638
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.664
LCUP008083 Lucilia cuprina LCUP008083 I 0.700
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.671
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.671
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.638
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.650
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.643
MCINX011946 Melitaea cinxia MCINX011946 I 0.750
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.614
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.671
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.629
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.664
MDOA003644 Musca domestica MDOA003644 I 0.707
MDOA004732 Musca domestica MDOA004732 I 0.721
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.671
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.630
Gcm2 Mus musculus ENSMUSG00000021362 I 0.674
Gcm1 Mus musculus ENSMUSG00000023333 D 0.630
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.621
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.671
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.621
NV17454 Nasonia vitripennis NV17454 I 0.721
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.671
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.686
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.671
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.679
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.679
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.673
gcm2 Oryzias latipes ENSORLG00000019715 I 0.664
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.629
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.679
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.623
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.686
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.664
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.681
PHUM436840 Pediculus humanus PHUM436840 I 0.757
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.652
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.674
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.664
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.721
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.667
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.659
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.671
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.671
GCM2 Procavia capensis ENSPCAG00000011887 I 0.671
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.636
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.650
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.664
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.630
RPRC001299 Rhodnius prolixus RPRC001299 I 0.743
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.650
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.636
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.688
SSLN_0001903801 Schistocephalus solidus SSLN_0001903801 I 0.621
SINV21711 Solenopsis invicta SINV21711 I 0.743
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.614
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.643
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.657
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.671
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.638
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.679
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.757
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.674
TC014730 Tribolium castaneum TC014730 I 0.757
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.671
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.621
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.671
Tal_R009935 Tyto alba Tal_R009935 I 0.650
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.681
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.614
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.645
gcm2.S Xenopus laevis XB-GENE-866131 I 0.671
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.671
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.657
L798_07938 Zootermopsis nevadensis L798_07938 I 0.764