Ocbimv22027544m.g (Octopus bimaculoides)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 Ocbimv22027544m.g T198180_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.714 0.714
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.714 0.714
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.714 0.714
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.714 0.714
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.686 0.686
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.686 0.686
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.686 0.686
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.671 0.671
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.671 0.671
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.671 0.671
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.671 0.671
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.671 0.671
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.664 0.664
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.657 0.657
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.650 0.650
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.643 0.643
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.621 0.621
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.621 0.621
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22027544m.p GCM 51 191

Links

Other GCM family TFs
Other Octopus bimaculoides TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.786
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.771
LotgiG112320 Lottia gigantea LotgiG112320 I 0.771
L798_07938 Zootermopsis nevadensis L798_07938 I 0.764
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.757
PHUM436840 Pediculus humanus PHUM436840 I 0.757
GB45031 Apis mellifera GB45031 I 0.757
TC014730 Tribolium castaneum TC014730 I 0.757
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.757
ACEP23384 Atta cephalotes ACEP23384 I 0.757
MCINX011946 Melitaea cinxia MCINX011946 I 0.750
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.750
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.750
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.750
HMEL005671 Heliconius melpomene HMEL005671 I 0.750
KGM_05743 Danaus plexippus KGM_05743 I 0.750
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.750
RPRC001299 Rhodnius prolixus RPRC001299 I 0.743
ISCW022914 Ixodes scapularis ISCW022914 I 0.743
AEPI007160 Anopheles epiroticus AEPI007160 I 0.743
ADIR000711 Anopheles dirus ADIR000711 I 0.743
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.743
SINV21711 Solenopsis invicta SINV21711 I 0.743
ACHR001414 Anopheles christyi ACHR001414 I 0.743
CLEC013329 Cimex lectularius CLEC013329 I 0.743
AMAM003661 Anopheles maculatus AMAM003661 I 0.736
AGAP007783 Anopheles gambiae AGAP007783 I 0.736
AFUN009837 Anopheles funestus AFUN009837 I 0.736
AFAF005680 Anopheles farauti AFAF005680 I 0.736
ACUA009622 Anopheles culicifacies ACUA009622 I 0.736
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.736
AMIN006368 Anopheles minimus AMIN006368 I 0.736
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.736
AARA011980 Anopheles arabiensis AARA011980 I 0.729
AMEC020313 Anopheles melas AMEC020313 I 0.721
GG24019 Drosophila erecta FBgn0116158 I 0.721
GL19218 Drosophila persimilis FBgn0156817 I 0.721
AALB008013 Anopheles albimanus AALB008013 I 0.721
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.721
GE10457 Drosophila yakuba FBgn0228318 I 0.721
MDOA004732 Musca domestica MDOA004732 I 0.721
NV17454 Nasonia vitripennis NV17454 I 0.721
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.721
ASIS002985 Anopheles sinensis ASIS002985 I 0.721
GF21907 Drosophila ananassae FBgn0098907 I 0.714
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.714
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.714
GM12386 Drosophila sechellia FBgn0167323 I 0.714
ADAC002327 Anopheles darlingi ADAC002327 I 0.714
AATE008476 Anopheles atroparvus AATE008476 I 0.714
gcm Drosophila melanogaster FBgn0014179 D 0.714
AAEL000623 Aedes aegypti AAEL000623 I 0.714
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.714
ACOM031025 Anopheles coluzzii ACOM031025 I 0.713
AMEM005966 Anopheles merus AMEM005966 I 0.713
CapteG133139 Capitella teleta CapteG133139 I 0.707
MDOA003644 Musca domestica MDOA003644 I 0.707
GK23810 Drosophila willistoni FBgn0225772 I 0.707
GI17574 Drosophila mojavensis FBgn0140318 I 0.700
GH11056 Drosophila grimshawi FBgn0118537 I 0.700
GJ17916 Drosophila virilis FBgn0205084 I 0.700
LCUP008083 Lucilia cuprina LCUP008083 I 0.700
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.700
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.696
GH10675 Drosophila grimshawi FBgn0118156 I 0.693
GI11073 Drosophila mojavensis FBgn0133835 I 0.693
GJ18313 Drosophila virilis FBgn0205472 I 0.693
GE18856 Drosophila yakuba FBgn0236239 I 0.693
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.688
AMAM005757 Anopheles maculatus AMAM005757 I 0.688
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.688
gcm2 Drosophila melanogaster FBgn0019809 D 0.686
GD22349 Drosophila simulans FBgn0193756 I 0.686
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.686
GF22779 Drosophila ananassae FBgn0099773 I 0.686
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.686
GCM2 Bos taurus ENSBTAG00000018787 I 0.686
GG10041 Drosophila erecta FBgn0102353 I 0.686
GM17569 Drosophila sechellia FBgn0172477 I 0.686
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.681
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.681
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.681
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.681
GL18919 Drosophila persimilis FBgn0156520 I 0.679
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.679
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.679
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.679
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.679
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.679
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.674
Gcm2 Mus musculus ENSMUSG00000021362 I 0.674
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.674
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.674
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.673
GCM2 Canis familiaris ENSCAFG00000009747 I 0.671
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.671
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.671
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.671
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.671
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.671
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.671
ASIS021139 Anopheles sinensis ASIS021139 I 0.671
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.671
GCM2 Equus caballus ENSECAG00000017632 I 0.671
GCM2 Felis catus ENSFCAG00000001608 I 0.671
GCM2 Homo sapiens ENSG00000124827 D 0.671
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.671
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.671
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.671
AALB008012 Anopheles albimanus AALB008012 I 0.671
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.671
gcm2 Danio rerio ENSDARG00000045413 I 0.671
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.671
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.671
gcm2.S Xenopus laevis XB-GENE-866131 I 0.671
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.671
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.671
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.671
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.671
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.671
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.671
GCM2 Procavia capensis ENSPCAG00000011887 I 0.671
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.667
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.667
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.667
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.664
Aan_R001550 Calypte anna Aan_R001550 I 0.664
AAEL000631 Aedes aegypti AAEL000631 I 0.664
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.664
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.664
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.664
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.664
AATE020589 Anopheles atroparvus AATE020589 I 0.664
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.664
gcm2 Oryzias latipes ENSORLG00000019715 I 0.664
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.664
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.664
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.664
GK23867 Drosophila willistoni FBgn0225829 I 0.664
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.664
GCM2 Echinops telfairi ENSETEG00000012473 I 0.661
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.659
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.659
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.659
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.659
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.657
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.657
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.657
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.657
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.657
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.657
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.657
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.657
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.652
AARA011979 Anopheles arabiensis AARA011979 I 0.650
GCM2 Gallus gallus ENSGALG00000012768 I 0.650
AMEM008520 Anopheles merus AMEM008520 I 0.650
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.650
AFAF000663 Anopheles farauti AFAF000663 I 0.650
AEPI007161 Anopheles epiroticus AEPI007161 I 0.650
ADIR000710 Anopheles dirus ADIR000710 I 0.650
ACOM031032 Anopheles coluzzii ACOM031032 I 0.650
GCM1 Gallus gallus ENSGALG00000016316 I 0.650
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.650
Tal_R009935 Tyto alba Tal_R009935 I 0.650
AGAP007782 Anopheles gambiae AGAP007782 I 0.650
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.650
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.650
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.645
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.645
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.643
ACHR004082 Anopheles christyi ACHR004082 I 0.643
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.643
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.643
ACUA018162 Anopheles culicifacies ACUA018162 I 0.643
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.643
Aan_R001196 Calypte anna Aan_R001196 I 0.643
AFUN009836 Anopheles funestus AFUN009836 I 0.643
AMIN006367 Anopheles minimus AMIN006367 I 0.643
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.643
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.643
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.643
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.638
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.638
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.638
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.636
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.636
GCM1 Felis catus ENSFCAG00000009490 I 0.630
Gcm1 Mus musculus ENSMUSG00000023333 D 0.630
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.630
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.630
GCM1 Canis familiaris ENSCAFG00000002273 I 0.630
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.629
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.629
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.629
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.629
GCM1 Bos taurus ENSBTAG00000008148 I 0.623
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.623
GCM1 Equus caballus ENSECAG00000014228 I 0.623
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.623
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.621
SSLN_0001903801 Schistocephalus solidus SSLN_0001903801 I 0.621
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.621
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.621
DILT_0000717101 Diphyllobothrium latum DILT_0000717101 I 0.614
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.614
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.614
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.614
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.614