CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMEM005966
(
Anopheles merus
)
GCM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03615 (GCM)
IPR003902
AMEM005966
T198220_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gcm2
M02026_2.00
Drosophila melanogaster
ATGCGGGY
RCCCGCAT
PBM
Weirauch et al.(2014)
pTH8361
0.805
0.805
gcm2
M03767_2.00
Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN
SELEX
Nitta et al.(2015)
gcm2_1
0.805
0.805
gcm2
M03768_2.00
Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV
SELEX
Nitta et al.(2015)
gcm2_2
0.805
0.805
gcm
M03764_2.00
Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD
SELEX
Nitta et al.(2015)
gcm_1
0.782
0.782
gcm
M03765_2.00
Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB
SELEX
Nitta et al.(2015)
gcm_2
0.782
0.782
gcm
M03766_2.00
Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR
SELEX
Nitta et al.(2015)
gcm_3
0.782
0.782
gcm
M10605_2.00
Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN
Transfac
Matys et al.(2006)
I$GCM_01
0.782
0.782
GCM2
M02023_2.00
Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN
PBM
Weirauch et al.(2014)
pTH9341
0.655
0.655
GCM2
M03067_2.00
Homo sapiens
NATGCGGGYD
HRCCCGCATN
SELEX
Jolma et al.(2013)
GCM2_1
0.655
0.655
GCM2
M04881_2.00
Homo sapiens
RTGCGGGYN
NRCCCGCAY
SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX
0.655
0.655
GCM2
M10602_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMB_Q2
0.655
0.655
GCM2
M04882_2.00
Homo sapiens
ATRHKGGYN
NRCCMDYAT
SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX
0.655
0.655
gcm2
M02024_2.00
Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT
PBM
Weirauch et al.(2014)
pTH9386
0.644
0.644
ENSTRUG00000003586
M02025_2.00
Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN
PBM
Weirauch et al.(2014)
pTH9357
0.644
0.644
Gcm1
M00168_2.00
Mus musculus
NVTRVGGGY
RCCCBYABN
PBM
Badis et al.(2009)
Gcm1_3732
0.621
0.621
Gcm1
M02022_2.00
Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN
PBM
Weirauch et al.(2014)
pTH9283
0.621
0.621
GCM1
M02020_2.00
Homo sapiens
NVTVNGGGN
NCCCNBABN
PBM
Weirauch et al.(2014)
pTH7965
0.609
0.609
GCM1
M02021_2.00
Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB
PBM
Weirauch et al.(2014)
pTH8653
0.609
0.609
GCM1
M03068_2.00
Homo sapiens
BATGCGGGTR
YACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_1
0.609
0.609
GCM1
M03069_2.00
Homo sapiens
RTRYKGGYRCCMGYAN
NTRCKGGYRCCMRYAY
SELEX
Jolma et al.(2013)
GCM1_2
0.609
0.609
GCM1
M03070_2.00
Homo sapiens
BATGCGGGTRS
SYACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_3
0.609
0.609
GCM1
M04883_2.00
Homo sapiens
RTGSGGGBV
BVCCCSCAY
SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX
0.609
0.609
GCM1
M05868_2.00
Homo sapiens
ATGCGGGYV
BRCCCGCAT
SMiLE-seq
Isakova et al.(2017)
GCM1
0.609
0.609
GCM1
M10603_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMA_Q4
0.609
0.609
GCM1
M10604_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCM_Q2
0.609
0.609
GCM1
M04884_2.00
Homo sapiens
ATRNKGGYV
BRCCMNYAT
SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX
0.609
0.609
For this family, TFs with SR scores >
0.607
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMEM005966-PA
GCM
57
143
YDAFNEWSDGHCRYIYRGTSEEAKRHSSGWAMRNTNNHNVNILKKSCLGVLVCSAGCILPNGDKIHLRPAICDKARRKQQGKACPNR
Links
Other
GCM
family TFs
Other
Anopheles merus
TFs
164 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AQUA003642
Anopheles quadriannulatus
AQUA003642
I
1.000
ACOM031025
Anopheles coluzzii
ACOM031025
I
1.000
AGAP007783
Anopheles gambiae
AGAP007783
I
1.000
AARA011980
Anopheles arabiensis
AARA011980
I
0.989
ASTEI01672
Anopheles stephensi
ASTEI01672
I
0.977
AMIN006368
Anopheles minimus
AMIN006368
I
0.977
AMAM003661
Anopheles maculatus
AMAM003661
I
0.977
AFUN009837
Anopheles funestus
AFUN009837
I
0.966
AFAF005680
Anopheles farauti
AFAF005680
I
0.954
ADIR000711
Anopheles dirus
ADIR000711
I
0.943
ASIS002985
Anopheles sinensis
ASIS002985
I
0.908
AALB008013
Anopheles albimanus
AALB008013
I
0.908
AAEL000623
Aedes aegypti
AAEL000623
I
0.885
AATE008476
Anopheles atroparvus
AATE008476
I
0.885
LDEC012509
Leptinotarsa decemlineata
LDEC012509
I
0.816
GG10041
Drosophila erecta
FBgn0102353
I
0.805
YQE_03062
Dendroctonus ponderosae
YQE_03062
I
0.805
gcm2
Drosophila melanogaster
FBgn0019809
D
0.805
GF22779
Drosophila ananassae
FBgn0099773
I
0.805
AALB008012
Anopheles albimanus
AALB008012
I
0.793
PPAI003635
Phlebotomus papatasi
PPAI003635
I
0.793
GJ18313
Drosophila virilis
FBgn0205472
I
0.782
GE10457
Drosophila yakuba
FBgn0228318
I
0.782
GD22349
Drosophila simulans
FBgn0193756
I
0.782
GH10675
Drosophila grimshawi
FBgn0118156
I
0.782
gcm
Drosophila melanogaster
FBgn0014179
D
0.782
MDOA003644
Musca domestica
MDOA003644
I
0.782
GM12386
Drosophila sechellia
FBgn0167323
I
0.782
L798_07938
Zootermopsis nevadensis
L798_07938
I
0.782
ASIS021139
Anopheles sinensis
ASIS021139
I
0.782
GL18919
Drosophila persimilis
FBgn0156520
I
0.770
GJ17916
Drosophila virilis
FBgn0205084
I
0.770
GI17574
Drosophila mojavensis
FBgn0140318
I
0.770
LCUP008083
Lucilia cuprina
LCUP008083
I
0.770
GA17734
Drosophila pseudoobscura
FBgn0077744
I
0.770
GF21907
Drosophila ananassae
FBgn0098907
I
0.759
PHUM436840
Pediculus humanus
PHUM436840
I
0.759
GK23867
Drosophila willistoni
FBgn0225829
I
0.759
MDOA004732
Musca domestica
MDOA004732
I
0.759
GK23810
Drosophila willistoni
FBgn0225772
I
0.747
ISCW022914
Ixodes scapularis
ISCW022914
I
0.747
BGIBMGA006182
Bombyx mori
BGIBMGA006182
I
0.747
DAPPUDRAFT_26189
Daphnia pulex
DAPPUDRAFT_26189
I
0.747
AMEM008520
Anopheles merus
AMEM008520
I
0.736
AGAP007782
Anopheles gambiae
AGAP007782
I
0.736
ACYPI34548
Acyrthosiphon pisum
ACYPI34548
I
0.736
AEPI007161
Anopheles epiroticus
AEPI007161
I
0.736
AQUA003641
Anopheles quadriannulatus
AQUA003641
I
0.736
ACOM031032
Anopheles coluzzii
ACOM031032
I
0.736
HMEL005671
Heliconius melpomene
HMEL005671
I
0.736
MCINX011946
Melitaea cinxia
MCINX011946
I
0.736
ASTEI01673
Anopheles stephensi
ASTEI01673
I
0.736
AARA011979
Anopheles arabiensis
AARA011979
I
0.736
SINV21711
Solenopsis invicta
SINV21711
I
0.736
Cflo_04549--XP_393815.2_APIME
Camponotus floridanus
Cflo_04549--XP_393815.2_APIME
I
0.724
AFAF000663
Anopheles farauti
AFAF000663
I
0.724
NV17454
Nasonia vitripennis
NV17454
I
0.724
Ocbimv22027544m.g
Octopus bimaculoides
Ocbimv22027544m.g
I
0.713
gcm2
Danio rerio
ENSDARG00000045413
I
0.701
GCM2
Vicugna pacos
ENSVPAG00000003006
I
0.690
ENSSHAG00000010590
Sarcophilus harrisii
ENSSHAG00000010590
I
0.690
ENSXMAG00000002726
Xiphophorus maculatus
ENSXMAG00000002726
I
0.690
CGI_10019940
Crassostrea gigas
CGI_10019940
I
0.690
ENSLOCG00000013145
Lepisosteus oculatus
ENSLOCG00000013145
I
0.690
Sakowv30018670m.g
Saccoglossus kowalevskii
Sakowv30018670m.g
I
0.678
ENSPFOG00000008781
Poecilia formosa
ENSPFOG00000008781
I
0.678
GCM2
Choloepus hoffmanni
ENSCHOG00000011562
I
0.678
LotgiG112320
Lottia gigantea
LotgiG112320
I
0.678
GCM2
Ornithorhynchus anatinus
ENSOANG00000007191
I
0.678
ENSONIG00000009885
Oreochromis niloticus
ENSONIG00000009885
I
0.678
CapteG133139
Capitella teleta
CapteG133139
I
0.678
GCM2
Oryctolagus cuniculus
ENSOCUG00000017698
I
0.667
GCM2
Felis catus
ENSFCAG00000001608
I
0.667
GCM2
Pan troglodytes
ENSPTRG00000017724
I
0.667
Afo_R013226
Aptenodytes forsteri
Afo_R013226
I
0.667
Gfo_R006501
Geospiza fortis
Gfo_R006501
I
0.667
GCM2
Equus caballus
ENSECAG00000017632
I
0.667
ENSMPUG00000000633
Mustela putorius furo
ENSMPUG00000000633
I
0.667
Aan_R001550
Calypte anna
Aan_R001550
I
0.667
GCM2
Myotis lucifugus
ENSMLUG00000004637
I
0.667
GCM2
Monodelphis domestica
ENSMODG00000010371
I
0.667
gcm2
Oryzias latipes
ENSORLG00000019715
I
0.667
Brh_R007088
Buceros rhinoceros
Brh_R007088
I
0.667
GCM2
Loxodonta africana
ENSLAFG00000007475
I
0.667
ENSAPLG00000002817
Anas platyrhynchos
ENSAPLG00000002817
I
0.667
ENSAMXG00000006073
Astyanax mexicanus
ENSAMXG00000006073
I
0.667
GCM2
Tursiops truncatus
ENSTTRG00000003674
I
0.667
GCM2
Canis familiaris
ENSCAFG00000009747
I
0.667
ENSLACG00000009363
Latimeria chalumnae
ENSLACG00000009363
I
0.667
GCM2
Meleagris gallopavo
ENSMGAG00000003533
I
0.667
GCM2
Gallus gallus
ENSGALG00000012768
I
0.667
ENSFALG00000013344
Ficedula albicollis
ENSFALG00000013344
I
0.655
GCM2
Homo sapiens
ENSG00000124827
D
0.655
Pvit_11235
Pogona vitticeps
Pvit_11235
I
0.655
GCM2
Macaca mulatta
ENSMMUG00000007719
I
0.655
GCM2
Pteropus vampyrus
ENSPVAG00000004876
I
0.655
ENSP00000368805
Macaca fascicularis
ENSP00000368805
I
0.655
ENSGMOG00000012709
Gadus morhua
ENSGMOG00000012709
I
0.655
ENSTSYG00000006813
Tarsius syrichta
ENSTSYG00000006813
I
0.655
Cmyd_10006831
Chelonia mydas
Cmyd_10006831
I
0.655
ENSCSAG00000007467
Chlorocebus sabaeus
ENSCSAG00000007467
I
0.655
ENSPPYG00000016228
Pongo abelii
ENSPPYG00000016228
I
0.655
ENSAMEG00000002669
Ailuropoda melanoleuca
ENSAMEG00000002669
I
0.655
ENSNLEG00000000645
Nomascus leucogenys
ENSNLEG00000000645
I
0.655
GCM2
Gorilla gorilla
ENSGGOG00000023360
I
0.655
GCM2
Taeniopygia guttata
ENSTGUG00000005756
D
0.655
gcm2.S
Xenopus laevis
XB-GENE-866131
I
0.644
gcm2
Xenopus tropicalis
XB-GENE-492156
I
0.644
Gcm2
Mus musculus
ENSMUSG00000021362
I
0.644
GCM2
Anolis carolinensis
ENSACAG00000008677
I
0.644
ENSTRUG00000003586
Takifugu rubripes
ENSTRUG00000003586
D
0.644
Gcm2
Rattus norvegicus
ENSRNOG00000015008
I
0.644
EmuJ_001115800
Echinococcus multilocularis
EmuJ_001115800
N
0.644
TsM_000040500
Taenia solium
TsM_000040500
N
0.644
GCM2
Callithrix jacchus
ENSCJAG00000019182
I
0.644
GCM2
Bos taurus
ENSBTAG00000018787
I
0.644
Ogr12931
Ophisaurus gracilis
Ogr12931
I
0.644
ENSOARG00000015521
Ovis aries
ENSOARG00000015521
I
0.644
GCM2
Otolemur garnettii
ENSOGAG00000012176
I
0.644
GCM2
Procavia capensis
ENSPCAG00000011887
I
0.644
GCM2
Ochotona princeps
ENSOPRG00000012641
I
0.644
gw.285.88.1
Branchiostoma floridae
gw.285.88.1
I
0.632
Alligator_sinensis_CCG000160.1
Alligator sinensis
Alligator_sinensis_CCG000160.1
I
0.632
GCM2
Tupaia belangeri
ENSTBEG00000006181
I
0.632
ENSMICG00000004238
Microcebus murinus
ENSMICG00000004238
I
0.632
Myotis_brandtii_Gcm1_10005135
Myotis brandtii
Myotis_brandtii_Gcm1_10005135
I
0.632
GCM1
Myotis lucifugus
ENSMLUG00000002762
I
0.632
GCM1
Monodelphis domestica
ENSMODG00000018803
I
0.621
AMEC020313
Anopheles melas
AMEC020313
I
0.621
GCM1
Canis familiaris
ENSCAFG00000002273
I
0.621
ENSSHAG00000015905
Sarcophilus harrisii
ENSSHAG00000015905
I
0.621
T265_00115
Opisthorchis viverrini
T265_00115
I
0.621
csin108204
Clonorchis sinensis
csin108204
I
0.621
GCM1
Pteropus vampyrus
ENSPVAG00000013341
I
0.621
ENSPMAG00000009211
Petromyzon marinus
ENSPMAG00000009211
I
0.621
ENSMPUG00000008870
Mustela putorius furo
ENSMPUG00000008870
I
0.621
Tal_R009935
Tyto alba
Tal_R009935
I
0.621
GCM1
Felis catus
ENSFCAG00000009490
I
0.621
Brh_R000788
Buceros rhinoceros
Brh_R000788
I
0.609
GCM1
Gorilla gorilla
ENSGGOG00000006527
I
0.609
ENSAMEG00000005755
Ailuropoda melanoleuca
ENSAMEG00000005755
I
0.609
ENSP00000259803
Macaca fascicularis
ENSP00000259803
I
0.609
ENSSSCG00000002630
Sus scrofa
ENSSSCG00000002630
I
0.609
GCM1
Pan troglodytes
ENSPTRG00000018288
I
0.609
SPER_0002793601
Spirometra erinaceieuropaei
SPER_0002793601
N
0.609
ENSPPYG00000016719
Pongo abelii
ENSPPYG00000016719
I
0.609
SMTD_0000548601
Schistosoma mattheei
SMTD_0000548601
I
0.609
SMRZ_0001689701
Schistosoma margrebowiei
SMRZ_0001689701
I
0.609
GCM1
Gallus gallus
ENSGALG00000016316
I
0.609
Gfo_R013721
Geospiza fortis
Gfo_R013721
I
0.609
GCM1
Tursiops truncatus
ENSTTRG00000015250
I
0.609
ENSCSAG00000013148
Chlorocebus sabaeus
ENSCSAG00000013148
I
0.609
GCM1
Homo sapiens
ENSG00000137270
D
0.609
GCM1
Macaca mulatta
ENSMMUG00000022083
I
0.609
ENSETEG00000005181
Echinops telfairi
ENSETEG00000005181
I
0.609
GCM1
Meleagris gallopavo
ENSMGAG00000013927
D
0.609
ENSCPOG00000006856
Cavia porcellus
ENSCPOG00000006856
I
0.609
Smp_171130
Schistosoma mansoni
Smp_171130
I
0.609
GCM1
Vicugna pacos
ENSVPAG00000006379
I
0.609
Afo_R000272
Aptenodytes forsteri
Afo_R000272
I
0.609
ENSNLEG00000003544
Nomascus leucogenys
ENSNLEG00000003544
I
0.609
Aan_R001196
Calypte anna
Aan_R001196
I
0.609
GCM1
Callithrix jacchus
ENSCJAG00000011189
I
0.609
ENSTGUG00000012867
Taeniopygia guttata
ENSTGUG00000012867
I
0.609