ENSETEG00000005181 (Echinops telfairi)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSETEG00000005181 T197990_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GCM1
M02020_2.00 		Homo sapiens
NVTVNGGGN
NCCCNBABN		 PBM
Weirauch et al.(2014)
pTH7965 		0.797 0.797
GCM1
M03068_2.00 		Homo sapiens
BATGCGGGTR
YACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_1 		0.797 0.797
GCM1
M03069_2.00 		Homo sapiens
RTRYKGGYRCCMGYAN
NTRCKGGYRCCMRYAY		 SELEX
Jolma et al.(2013)
GCM1_2 		0.797 0.797
GCM1
M03070_2.00 		Homo sapiens
BATGCGGGTRS
SYACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_3 		0.797 0.797
GCM1
M04883_2.00 		Homo sapiens
RTGSGGGBV
BVCCCSCAY		 SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX 		0.797 0.797
GCM1
M05868_2.00 		Homo sapiens
ATGCGGGYV
BRCCCGCAT		 SMiLE-seq
Isakova et al.(2017)
GCM1 		0.797 0.797
GCM1
M10603_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMA_Q4 		0.797 0.797
GCM1
M10604_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCM_Q2 		0.797 0.797
GCM1
M04884_2.00 		Homo sapiens
ATRNKGGYV
BRCCMNYAT		 SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX 		0.797 0.797
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.790 0.790
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.783 0.783
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.775 0.775
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.754 0.754
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.630 0.630
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.616 0.616
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.616 0.616
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.616 0.616
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.616 0.616
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.616 0.616
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.609 0.609
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000004217 GCM 30 167

Links

Other GCM family TFs
Other Echinops telfairi TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.841
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.826
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.824
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.819
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.819
GCM1 Canis familiaris ENSCAFG00000002273 I 0.819
GCM1 Felis catus ENSFCAG00000009490 I 0.819
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.812
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.812
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.812
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.812
GCM1 Equus caballus ENSECAG00000014228 I 0.804
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.804
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.797
GCM1 Homo sapiens ENSG00000137270 D 0.797
ENSP00000259803 Macaca fascicularis ENSP00000259803 I 0.797
GCM1 Macaca mulatta ENSMMUG00000022083 I 0.797
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.797
ENSNLEG00000003544 Nomascus leucogenys ENSNLEG00000003544 I 0.797
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.797
GCM1 Gorilla gorilla ENSGGOG00000006527 I 0.797
ENSPPYG00000016719 Pongo abelii ENSPPYG00000016719 I 0.797
GCM1 Callithrix jacchus ENSCJAG00000011189 I 0.797
GCM1 Bos taurus ENSBTAG00000008148 I 0.797
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.797
GCM1 Pan troglodytes ENSPTRG00000018288 I 0.797
ENSCSAG00000013148 Chlorocebus sabaeus ENSCSAG00000013148 I 0.797
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.794
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.790
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.783
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.783
Gcm1 Mus musculus ENSMUSG00000023333 D 0.783
ENSSTOG00000014763 Ictidomys tridecemlineatus ENSSTOG00000014763 I 0.781
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.776
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.775
ENSSTOG00000022342 Ictidomys tridecemlineatus ENSSTOG00000022342 I 0.775
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.775
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.775
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.775
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.775
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.768
Aan_R001196 Calypte anna Aan_R001196 I 0.761
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.754
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.754
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.754
Tal_R009935 Tyto alba Tal_R009935 I 0.754
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.754
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.754
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.754
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.746
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.746
GCM1 Gallus gallus ENSGALG00000016316 I 0.746
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.739
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.739
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.717
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.674
Alligator_sinensis_CCG000160.1 Alligator sinensis Alligator_sinensis_CCG000160.1 I 0.659
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.652
GCM2 Gallus gallus ENSGALG00000012768 I 0.652
GCM1 Ochotona princeps ENSOPRG00000003290 I 0.645
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.638
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.638
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.638
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.638
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.638
gcm2 Danio rerio ENSDARG00000045413 I 0.638
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.630
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.630
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.630
Aan_R001550 Calypte anna Aan_R001550 I 0.630
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.630
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.630
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.623
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.623
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.616
gcm2.S Xenopus laevis XB-GENE-866131 I 0.616
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.616
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.616
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.616
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.616
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.616
Gcm2 Mus musculus ENSMUSG00000021362 I 0.616
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.616
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.616
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.616
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.616
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.616
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.616
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.616
GCM2 Homo sapiens ENSG00000124827 D 0.616
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.616
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.616
gcm2 Oryzias latipes ENSORLG00000019715 I 0.616
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.616
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.616
GCM2 Echinops telfairi ENSETEG00000012473 I 0.610
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.609
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.609
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.609
GCM2 Bos taurus ENSBTAG00000018787 I 0.609
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.609
AMEM005966 Anopheles merus AMEM005966 I 0.609
ACOM031025 Anopheles coluzzii ACOM031025 I 0.609
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.609
GCM2 Equus caballus ENSECAG00000017632 I 0.609
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.609
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.609
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.609
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.609
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.609
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.609
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.609
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.609