ENSPMAG00000009211 (Petromyzon marinus)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSPMAG00000009211 T198044_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.797 0.797
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.790 0.790
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.775 0.775
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.761 0.761
GCM1
M02020_2.00 		Homo sapiens
NVTVNGGGN
NCCCNBABN		 PBM
Weirauch et al.(2014)
pTH7965 		0.754 0.754
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.754 0.754
GCM1
M03068_2.00 		Homo sapiens
BATGCGGGTR
YACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_1 		0.754 0.754
GCM1
M03069_2.00 		Homo sapiens
RTRYKGGYRCCMGYAN
NTRCKGGYRCCMRYAY		 SELEX
Jolma et al.(2013)
GCM1_2 		0.754 0.754
GCM1
M03070_2.00 		Homo sapiens
BATGCGGGTRS
SYACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_3 		0.754 0.754
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.754 0.754
GCM1
M04883_2.00 		Homo sapiens
RTGSGGGBV
BVCCCSCAY		 SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX 		0.754 0.754
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.754 0.754
GCM1
M05868_2.00 		Homo sapiens
ATGCGGGYV
BRCCCGCAT		 SMiLE-seq
Isakova et al.(2017)
GCM1 		0.754 0.754
GCM1
M10603_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMA_Q4 		0.754 0.754
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.754 0.754
GCM1
M10604_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCM_Q2 		0.754 0.754
GCM1
M04884_2.00 		Homo sapiens
ATRNKGGYV
BRCCMNYAT		 SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX 		0.754 0.754
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.754 0.754
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.732 0.732
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.725 0.725
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.616 0.616
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.616 0.616
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.616 0.616
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.616 0.616
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.609 0.609
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.609 0.609
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.609 0.609
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000010133 GCM 37 174

Links

Other GCM family TFs
Other Petromyzon marinus TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.812
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.812
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.812
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.810
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.804
gcm2 Oryzias latipes ENSORLG00000019715 I 0.797
gcm2 Danio rerio ENSDARG00000045413 I 0.797
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.797
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.797
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.797
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.797
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.790
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.790
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.790
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.784
gcm2.S Xenopus laevis XB-GENE-866131 I 0.783
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.783
Aan_R001550 Calypte anna Aan_R001550 I 0.783
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.783
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.776
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.775
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.775
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.775
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.775
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.775
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.775
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.775
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.768
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.768
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.768
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.768
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.766
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.766
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.763
GCM2 Gallus gallus ENSGALG00000012768 I 0.761
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.761
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.761
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.761
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.761
GCM1 Macaca mulatta ENSMMUG00000022083 I 0.754
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.754
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.754
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.754
ENSP00000259803 Macaca fascicularis ENSP00000259803 I 0.754
ENSPPYG00000016719 Pongo abelii ENSPPYG00000016719 I 0.754
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.754
GCM1 Pan troglodytes ENSPTRG00000018288 I 0.754
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.754
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.754
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.754
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.754
ENSNLEG00000003544 Nomascus leucogenys ENSNLEG00000003544 I 0.754
Aan_R001196 Calypte anna Aan_R001196 I 0.754
GCM2 Homo sapiens ENSG00000124827 D 0.754
GCM1 Homo sapiens ENSG00000137270 D 0.754
GCM2 Equus caballus ENSECAG00000017632 I 0.754
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.754
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.754
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.754
GCM1 Gallus gallus ENSGALG00000016316 I 0.754
GCM2 Canis familiaris ENSCAFG00000009747 I 0.754
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.754
ENSCSAG00000013148 Chlorocebus sabaeus ENSCSAG00000013148 I 0.754
GCM1 Callithrix jacchus ENSCJAG00000011189 I 0.754
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.754
GCM1 Gorilla gorilla ENSGGOG00000006527 I 0.754
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.746
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.746
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.746
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.746
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.746
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.746
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.746
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.746
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.746
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.746
Tal_R009935 Tyto alba Tal_R009935 I 0.746
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.746
Gcm2 Mus musculus ENSMUSG00000021362 I 0.746
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.746
GCM2 Felis catus ENSFCAG00000001608 I 0.746
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.746
Ogr12931 Ophisaurus gracilis Ogr12931 I 0.742
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.739
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.739
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.739
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.739
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.739
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.739
GCM2 Bos taurus ENSBTAG00000018787 I 0.739
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.739
GCM2 Procavia capensis ENSPCAG00000011887 I 0.739
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.739
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.739
GCM1 Bos taurus ENSBTAG00000008148 I 0.739
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.739
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.739
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.739
GCM1 Equus caballus ENSECAG00000014228 I 0.739
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.739
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.739
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.739
GCM2 Echinops telfairi ENSETEG00000012473 I 0.737
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.732
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.732
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.732
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.732
GCM1 Canis familiaris ENSCAFG00000002273 I 0.732
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.732
Gcm1 Mus musculus ENSMUSG00000023333 D 0.732
GCM1 Felis catus ENSFCAG00000009490 I 0.732
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.732
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.732
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.732
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.732
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.732
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.725
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.725
ENSSTOG00000022342 Ictidomys tridecemlineatus ENSSTOG00000022342 I 0.725
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.725
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.725
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.725
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.721
GCM1 Ochotona princeps ENSOPRG00000003290 I 0.720
ENSSTOG00000014763 Ictidomys tridecemlineatus ENSSTOG00000014763 I 0.711
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.710
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.696
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.686
SMAR010130 Strigamia maritima SMAR010130 I 0.678
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.671
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.671
gw.285.88.1 Branchiostoma floridae gw.285.88.1 I 0.667
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.664
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.664
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.664
Alligator_sinensis_CCG000160.1 Alligator sinensis Alligator_sinensis_CCG000160.1 I 0.662
HMEL005671 Heliconius melpomene HMEL005671 I 0.659
TC014730 Tribolium castaneum TC014730 I 0.657
AMIN006368 Anopheles minimus AMIN006368 I 0.652
L798_07938 Zootermopsis nevadensis L798_07938 I 0.652
AMAM005757 Anopheles maculatus AMAM005757 I 0.651
ACHR001414 Anopheles christyi ACHR001414 I 0.650
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.650
KGM_05743 Danaus plexippus KGM_05743 I 0.650
MCINX011946 Melitaea cinxia MCINX011946 I 0.650
AGAP007783 Anopheles gambiae AGAP007783 I 0.645
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.645
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.645
NV17454 Nasonia vitripennis NV17454 I 0.645
CLEC013329 Cimex lectularius CLEC013329 I 0.643
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.643
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.643
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.643
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.643
GB45031 Apis mellifera GB45031 I 0.643
AFUN009837 Anopheles funestus AFUN009837 I 0.643
AMAM003661 Anopheles maculatus AMAM003661 I 0.643
AEPI007160 Anopheles epiroticus AEPI007160 I 0.643
RPRC001299 Rhodnius prolixus RPRC001299 I 0.643
AFAF005680 Anopheles farauti AFAF005680 I 0.638
AALB008013 Anopheles albimanus AALB008013 I 0.638
ISCW022914 Ixodes scapularis ISCW022914 I 0.638
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.636
SINV21711 Solenopsis invicta SINV21711 I 0.636
AAEL000623 Aedes aegypti AAEL000623 I 0.636
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.636
ACEP23384 Atta cephalotes ACEP23384 I 0.636
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.636
ACUA009622 Anopheles culicifacies ACUA009622 I 0.636
AATE008476 Anopheles atroparvus AATE008476 I 0.636
ENSETEG00000005181 Echinops telfairi ENSETEG00000005181 I 0.630
AARA011980 Anopheles arabiensis AARA011980 I 0.629
MDOA004732 Musca domestica MDOA004732 I 0.629
ASIS002985 Anopheles sinensis ASIS002985 I 0.629
ADIR000711 Anopheles dirus ADIR000711 I 0.629
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.629
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.629
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.629
PHUM436840 Pediculus humanus PHUM436840 I 0.629
CapteG133139 Capitella teleta CapteG133139 I 0.625
AMEM005966 Anopheles merus AMEM005966 I 0.621
AMEC020313 Anopheles melas AMEC020313 I 0.621
ASIS021139 Anopheles sinensis ASIS021139 I 0.621
ADAC002327 Anopheles darlingi ADAC002327 I 0.621
ADIR000710 Anopheles dirus ADIR000710 I 0.621
ACOM031025 Anopheles coluzzii ACOM031025 I 0.621
GF21907 Drosophila ananassae FBgn0098907 I 0.621
AMEM008520 Anopheles merus AMEM008520 I 0.616
GJ18313 Drosophila virilis FBgn0205472 I 0.616
AEPI007161 Anopheles epiroticus AEPI007161 I 0.616
ACOM031032 Anopheles coluzzii ACOM031032 I 0.616
AGAP007782 Anopheles gambiae AGAP007782 I 0.616
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.616
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.616
AARA011979 Anopheles arabiensis AARA011979 I 0.616
LotgiG112320 Lottia gigantea LotgiG112320 I 0.614
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.614
AALB008012 Anopheles albimanus AALB008012 I 0.614
gcm2 Drosophila melanogaster FBgn0019809 D 0.609
GK23810 Drosophila willistoni FBgn0225772 I 0.609
GJ17916 Drosophila virilis FBgn0205084 I 0.609
GI17574 Drosophila mojavensis FBgn0140318 I 0.609
GG10041 Drosophila erecta FBgn0102353 I 0.609
GF22779 Drosophila ananassae FBgn0099773 I 0.609