GE18856 (Drosophila yakuba)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 FBgn0236239 T198099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.993 0.993
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.993 0.993
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.993 0.993
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.714 0.714
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.714 0.714
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.714 0.714
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.714 0.714
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.671 0.671
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.671 0.671
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.671 0.671
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.671 0.671
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.650 0.650
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.650 0.650
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.643 0.643
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.614 0.614
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.614 0.614
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0263866 GCM 81 221

Links

Other GCM family TFs
Other Drosophila yakuba TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF22779 Drosophila ananassae FBgn0099773 I 0.993
GG10041 Drosophila erecta FBgn0102353 I 0.993
gcm2 Drosophila melanogaster FBgn0019809 D 0.993
GM17569 Drosophila sechellia FBgn0172477 I 0.986
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.964
GL18919 Drosophila persimilis FBgn0156520 I 0.964
GI11073 Drosophila mojavensis FBgn0133835 I 0.957
GJ18313 Drosophila virilis FBgn0205472 I 0.957
GH10675 Drosophila grimshawi FBgn0118156 I 0.950
GK23867 Drosophila willistoni FBgn0225829 I 0.950
MDOA003644 Musca domestica MDOA003644 I 0.907
LCUP008083 Lucilia cuprina LCUP008083 I 0.907
AFUN009837 Anopheles funestus AFUN009837 I 0.786
AEPI007160 Anopheles epiroticus AEPI007160 I 0.786
ADIR000711 Anopheles dirus ADIR000711 I 0.786
ACUA009622 Anopheles culicifacies ACUA009622 I 0.779
ACHR001414 Anopheles christyi ACHR001414 I 0.779
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.779
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.779
AGAP007783 Anopheles gambiae AGAP007783 I 0.779
AMIN006368 Anopheles minimus AMIN006368 I 0.779
AMAM003661 Anopheles maculatus AMAM003661 I 0.779
AARA011980 Anopheles arabiensis AARA011980 I 0.771
AMEC020313 Anopheles melas AMEC020313 I 0.771
AFAF005680 Anopheles farauti AFAF005680 I 0.771
ASIS002985 Anopheles sinensis ASIS002985 I 0.764
AAEL000623 Aedes aegypti AAEL000623 I 0.764
AALB008013 Anopheles albimanus AALB008013 I 0.757
AATE008476 Anopheles atroparvus AATE008476 I 0.757
ADAC002327 Anopheles darlingi ADAC002327 I 0.757
GJ17916 Drosophila virilis FBgn0205084 I 0.736
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.736
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.736
GI17574 Drosophila mojavensis FBgn0140318 I 0.729
MDOA004732 Musca domestica MDOA004732 I 0.729
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.729
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.721
GH11056 Drosophila grimshawi FBgn0118537 I 0.721
AMAM005757 Anopheles maculatus AMAM005757 I 0.716
MCINX011946 Melitaea cinxia MCINX011946 I 0.714
TC014730 Tribolium castaneum TC014730 I 0.714
AALB008012 Anopheles albimanus AALB008012 I 0.714
KGM_05743 Danaus plexippus KGM_05743 I 0.714
HMEL005671 Heliconius melpomene HMEL005671 I 0.714
gcm Drosophila melanogaster FBgn0014179 D 0.714
GE10457 Drosophila yakuba FBgn0228318 I 0.714
GM12386 Drosophila sechellia FBgn0167323 I 0.714
GF21907 Drosophila ananassae FBgn0098907 I 0.714
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.714
AAEL000631 Aedes aegypti AAEL000631 I 0.714
GG24019 Drosophila erecta FBgn0116158 I 0.707
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.707
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.707
L798_07938 Zootermopsis nevadensis L798_07938 I 0.707
GL19218 Drosophila persimilis FBgn0156817 I 0.707
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.700
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.700
ASIS021139 Anopheles sinensis ASIS021139 I 0.700
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.700
AATE020589 Anopheles atroparvus AATE020589 I 0.700
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.700
CLEC013329 Cimex lectularius CLEC013329 I 0.700
RPRC001299 Rhodnius prolixus RPRC001299 I 0.693
ACHR004082 Anopheles christyi ACHR004082 I 0.693
ACUA018162 Anopheles culicifacies ACUA018162 I 0.693
GK23810 Drosophila willistoni FBgn0225772 I 0.693
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.693
ADIR000710 Anopheles dirus ADIR000710 I 0.693
AARA011979 Anopheles arabiensis AARA011979 I 0.693
GB45031 Apis mellifera GB45031 I 0.693
ACOM031032 Anopheles coluzzii ACOM031032 I 0.693
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.693
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.693
AEPI007161 Anopheles epiroticus AEPI007161 I 0.693
PHUM436840 Pediculus humanus PHUM436840 I 0.693
AGAP007782 Anopheles gambiae AGAP007782 I 0.693
ACEP23384 Atta cephalotes ACEP23384 I 0.693
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.693
AMEM008520 Anopheles merus AMEM008520 I 0.693
AMIN006367 Anopheles minimus AMIN006367 I 0.693
AFUN009836 Anopheles funestus AFUN009836 I 0.693
AFAF000663 Anopheles farauti AFAF000663 I 0.693
GD22349 Drosophila simulans FBgn0193756 I 0.686
GCM2 Echinops telfairi ENSETEG00000012473 I 0.686
SINV21711 Solenopsis invicta SINV21711 I 0.686
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.681
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.679
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.679
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.679
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.674
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.671
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.671
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.671
GCM2 Homo sapiens ENSG00000124827 D 0.671
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.671
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.671
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.671
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.671
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.667
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.667
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.664
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.664
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.664
GCM2 Bos taurus ENSBTAG00000018787 I 0.664
NV17454 Nasonia vitripennis NV17454 I 0.664
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.664
gcm2 Danio rerio ENSDARG00000045413 I 0.664
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.659
GCM2 Canis familiaris ENSCAFG00000009747 I 0.657
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.657
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.657
GCM2 Equus caballus ENSECAG00000017632 I 0.657
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.657
gcm2 Oryzias latipes ENSORLG00000019715 I 0.657
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.657
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.657
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.657
GCM2 Felis catus ENSFCAG00000001608 I 0.657
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.657
Gcm2 Mus musculus ENSMUSG00000021362 I 0.657
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.657
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.657
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.657
ISCW022914 Ixodes scapularis ISCW022914 I 0.657
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.652
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.650
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.650
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.650
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.650
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.650
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.650
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.650
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.650
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.650
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.650
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.650
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.650
Aan_R001550 Calypte anna Aan_R001550 I 0.650
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.650
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.650
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.645
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.645
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.643
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.643
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.643
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.643
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.643
GCM2 Gallus gallus ENSGALG00000012768 I 0.643
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.643
gcm2.S Xenopus laevis XB-GENE-866131 I 0.643
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.643
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.643
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.643
LotgiG112320 Lottia gigantea LotgiG112320 I 0.636
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.636
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.636
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.636
CapteG133139 Capitella teleta CapteG133139 I 0.636
GCM2 Procavia capensis ENSPCAG00000011887 I 0.636
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.630
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.629
Gcm1 Mus musculus ENSMUSG00000023333 D 0.623
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.623
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.623
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.623
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.621
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.621
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.621
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.616
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.616
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.616
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.616
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.614
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.614
GCM1 Equus caballus ENSECAG00000014228 I 0.609