chr3.CM0282.640.nc (Lotus japonicus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 chr3.CM0282.640.nc T230813_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0282.640.nc Homeodomain 11 76

Links

Other Homeodomain family TFs
Other Lotus japonicus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.768
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.766
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.766
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.764
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.750
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.750
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.745
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.742
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.741
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.738
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.730
TCM_046875 Theobroma cacao TCM_046875 N 0.726
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.725
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.704
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.696
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.695
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.666
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.666
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.666
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.666
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.666
OS06G0485100 Oryza sativa OS06G0485100 N 0.666
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.666
OBART06G15310 Oryza barthii OBART06G15310 N 0.666
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.664
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.664
PK03811.1 Cannabis sativa PK03811.1 N 0.664
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.664
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.662
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.658
MDP0000315095 Malus domestica MDP0000315095 N 0.657
MDP0000268133 Malus domestica MDP0000268133 N 0.657
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.645
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.640
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.640
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.640
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.640
30209.m001510 Ricinus communis 30209.m001510 N 0.626
Bra037587 Brassica rapa Bra037587 N 0.624
Bo1g117640 Brassica oleracea Bo1g117640 N 0.624
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.618
mgf014854m Mimulus guttatus mgf014854m N 0.601