Ciclev10008640m.g (Citrus clementina)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ciclev10008640m.g T228375_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10008640m Homeodomain 11 76

Links

Other Homeodomain family TFs
Other Citrus clementina TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.867
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.850
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.850
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.850
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.849
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.849
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.849
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.845
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.845
TCM_046875 Theobroma cacao TCM_046875 N 0.838
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.836
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.834
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.812
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.785
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.781
PK03811.1 Cannabis sativa PK03811.1 N 0.774
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.771
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.771
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.771
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.769
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.765
MDP0000315095 Malus domestica MDP0000315095 N 0.762
MDP0000268133 Malus domestica MDP0000268133 N 0.762
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.750
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.749
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.747
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.747
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.747
Bo1g117640 Brassica oleracea Bo1g117640 N 0.734
Bra037587 Brassica rapa Bra037587 N 0.734
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.726
OBART06G15310 Oryza barthii OBART06G15310 N 0.726
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.726
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.726
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.726
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.726
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.726
OS06G0485100 Oryza sativa OS06G0485100 N 0.726
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.725
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.724
mgf014854m Mimulus guttatus mgf014854m N 0.711
30209.m001510 Ricinus communis 30209.m001510 N 0.710
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.654
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.654
Si030167m.g Setaria italica Si030167m.g N 0.654
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.650
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.649
Pm011344 Prunus mume Pm011344 N 0.602