Bo1g117640 (Brassica oleracea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bo1g117640 T204857_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g117640.1 Homeodomain 12 76

Links

Other Homeodomain family TFs
Other Brassica oleracea TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra037587 Brassica rapa Bra037587 N 0.867
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.833
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.814
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.814
PK03811.1 Cannabis sativa PK03811.1 N 0.813
mgf014854m Mimulus guttatus mgf014854m N 0.811
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.805
30209.m001510 Ricinus communis 30209.m001510 N 0.777
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.750
TCM_046875 Theobroma cacao TCM_046875 N 0.750
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.739
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.739
Si030167m.g Setaria italica Si030167m.g N 0.739
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.734
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.734
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.734
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.734
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.732
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.732
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.730
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.730
MDP0000268133 Malus domestica MDP0000268133 N 0.729
MDP0000315095 Malus domestica MDP0000315095 N 0.729
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.728
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.728
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.728
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.728
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.724
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.723
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.723
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.723
Bo5g118650 Brassica oleracea Bo5g118650 N 0.722
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.722
Carubv10014092m.g Capsella rubella Carubv10014092m.g N 0.710
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N 0.710
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N 0.710
AT3G18380 Arabidopsis thaliana AT3G18380 N 0.698
fgenesh2_kg.3__2039__AT3G18380.2 Arabidopsis lyrata fgenesh2_kg.3__2039__AT3G18380.2 N 0.698
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.692
OLONG_009303 Oryza longistaminata OLONG_009303 N 0.681
OPUNC06G13910 Oryza punctata OPUNC06G13910 N 0.681
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.667
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.662
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.662
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.662
Pm011344 Prunus mume Pm011344 N 0.654
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.644
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.644
OBART06G15310 Oryza barthii OBART06G15310 N 0.644
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.644
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.644
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.644
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.644
OS06G0485100 Oryza sativa OS06G0485100 N 0.644
Bra022316 Brassica rapa Bra022316 N 0.640
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.640
TRIUR3_24308 Triticum urartu TRIUR3_24308 N 0.639
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.624