MDP0000315095 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000315095 T229071_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000315095 Homeodomain 11 76

Links

Other Homeodomain family TFs
Other Malus domestica TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000268133 Malus domestica MDP0000268133 N 0.867
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.774
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.773
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.771
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.771
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.771
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.769
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.766
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.766
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.765
PK03811.1 Cannabis sativa PK03811.1 N 0.763
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.762
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.762
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.757
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.756
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.754
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.754
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.744
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.744
TCM_046875 Theobroma cacao TCM_046875 N 0.740
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.739
Bra037587 Brassica rapa Bra037587 N 0.729
Bo1g117640 Brassica oleracea Bo1g117640 N 0.729
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.718
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.714
30209.m001510 Ricinus communis 30209.m001510 N 0.706
mgf014854m Mimulus guttatus mgf014854m N 0.706
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.704
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.689
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.657
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.653
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.653
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.653
Si030167m.g Setaria italica Si030167m.g N 0.647
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.645
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.645
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.645
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.644
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.640
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.640
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.640
OS06G0485100 Oryza sativa OS06G0485100 N 0.640
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.640
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.640
OBART06G15310 Oryza barthii OBART06G15310 N 0.640
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.640
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.630
Pm011344 Prunus mume Pm011344 N 0.606