CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_052_00043
(
Aquilegia coerulea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Aquca_052_00043
T228064_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_052_00043.1
Homeodomain
11
76
AFRFTASEVAEMEACLQESNNAVPTREVLSTFADKFTNSPERAGKIIVLPKQVWNWFQNRRYAQKA
Aquca_052_00043.2
Homeodomain
11
76
AFRFTASEVAEMEACLQESNNAVPTREVLSTFADKFTNSPERAGKIIVLPKQVWNWFQNRRYAQKA
Links
Other
Homeodomain
family TFs
Other
Aquilegia coerulea
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00011p00262800
Amborella trichopoda
AMTR_s00011p00262800
N
0.817
orange1.1g016887m.g
Citrus sinensis
orange1.1g016887m.g
N
0.812
Ciclev10008640m.g
Citrus clementina
Ciclev10008640m.g
N
0.812
TCM_046875
Theobroma cacao
TCM_046875
N
0.808
Gorai.013G172000
Gossypium raimondii
Gorai.013G172000
N
0.808
Cucsa.032420
Cucumis sativus
Cucsa.032420
N
0.808
VIT_19s0014g01880
Vitis vinifera
VIT_19s0014g01880
N
0.807
Lus10017944.g
Linum usitatissimum
Lus10017944.g
N
0.804
Lus10013684.g
Linum usitatissimum
Lus10013684.g
N
0.804
GLYMA12G18490
Glycine max
GLYMA12G18490
N
0.803
PRUPE_ppa007389mg
Prunus persica
PRUPE_ppa007389mg
N
0.803
chr3.CM0282.620.nc
Lotus japonicus
chr3.CM0282.620.nc
N
0.803
GLYMA06G35561
Glycine max
GLYMA06G35561
N
0.801
MTR_8g061040
Medicago truncatula
MTR_8g061040
N
0.801
Traes_7DS_197A95728
Triticum aestivum
Traes_7DS_197A95728
N
0.760
MLOC_61712
Hordeum vulgare
MLOC_61712
N
0.760
TRIUR3_19251
Triticum urartu
TRIUR3_19251
N
0.760
BRADI1G42040
Brachypodium distachyon
BRADI1G42040
N
0.758
GSMUA_Achr4G18450_001
Musa acuminata
GSMUA_Achr4G18450_001
N
0.756
OPUNC06G13990
Oryza punctata
OPUNC06G13990
N
0.743
OBART06G15310
Oryza barthii
OBART06G15310
N
0.743
LPERR06G11990
Leersia perrieri
LPERR06G11990
N
0.743
BGIOSGA021223
Oryza indica
BGIOSGA021223
N
0.743
OMERI06G16500
Oryza meridionalis
OMERI06G16500
N
0.743
OLONG_009306
Oryza longistaminata
OLONG_009306
N
0.743
OS06G0485100
Oryza sativa
OS06G0485100
N
0.743
ORUFI06G16210
Oryza rufipogon
ORUFI06G16210
N
0.743
Eucgr.F01181
Eucalyptus grandis
Eucgr.F01181
N
0.740
Gorai.002G065900
Gossypium raimondii
Gorai.002G065900
N
0.726
PK03811.1
Cannabis sativa
PK03811.1
N
0.724
SapurV1A.0083s0320
Salix purpurea
SapurV1A.0083s0320
N
0.722
Bo1g117640
Brassica oleracea
Bo1g117640
N
0.722
Bra037587
Brassica rapa
Bra037587
N
0.722
POPTR_0011s09970
Populus trichocarpa
POPTR_0011s09970
N
0.722
SapurV1A.0303s0100
Salix purpurea
SapurV1A.0303s0100
N
0.722
Solyc10g007130.2
Solanum lycopersicum
Solyc10g007130.2
N
0.719
gene27205-v1.0-hybrid
Fragaria vesca
gene27205-v1.0-hybrid
N
0.718
MDP0000315095
Malus domestica
MDP0000315095
N
0.718
MDP0000268133
Malus domestica
MDP0000268133
N
0.718
mgf014854m
Mimulus guttatus
mgf014854m
N
0.710
chr3.CM0282.640.nc
Lotus japonicus
chr3.CM0282.640.nc
N
0.704
30209.m001510
Ricinus communis
30209.m001510
N
0.687
Pavir.Bb01334
Panicum virgatum
Pavir.Bb01334
N
0.668
Pavir.Ba02980
Panicum virgatum
Pavir.Ba02980
N
0.668
Si030167m.g
Setaria italica
Si030167m.g
N
0.668
Sb02g020940
Sorghum bicolor
Sb02g020940
N
0.663
GRMZM2G126170
Zea mays
GRMZM2G126170
N
0.662
OLONG_009303
Oryza longistaminata
OLONG_009303
N
0.629
OPUNC06G13910
Oryza punctata
OPUNC06G13910
N
0.629