PRUPE_ppa018667mg (Prunus persica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PRUPE_ppa018667mg T255922_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SVP
M06984_2.00 		Arabidopsis thaliana
DDCCVAAWANGGHAA
TTDCCNTWTTBGGHH		 Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b 		0.729 0.729
SVP
M06985_2.00 		Arabidopsis thaliana
CCMAAWANGGWAANW
WNTTWCCNTWTTKGG		 Dap-seq
OMalley et al.(2016)
SVP_col_v3b 		0.729 0.729
SVP
M08424_2.00 		Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH
DDYTTTCCHTTTTKGGDWWN		 ChIP-chip
Mathelier et al.(2014)
MA0555.1 		0.729 0.729
MADS2
M10966_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_02 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ27459 MADS box 14 61

Links

Other MADS box family TFs
Other Prunus persica TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm004420 Prunus mume Pm004420 I 0.979
Pm004417 Prunus mume Pm004417 I 0.958
PRUPE_ppa011123mg Prunus persica PRUPE_ppa011123mg I 0.958
Pm004418 Prunus mume Pm004418 I 0.938
Pm004416 Prunus mume Pm004416 I 0.938
Pm004419 Prunus mume Pm004419 I 0.938
PRUPE_ppa010758mg Prunus persica PRUPE_ppa010758mg I 0.938
PRUPE_ppb017585mg Prunus persica PRUPE_ppb017585mg I 0.938
PRUPE_ppa010822mg Prunus persica PRUPE_ppa010822mg I 0.938
PRUPE_ppa010714mg Prunus persica PRUPE_ppa010714mg I 0.896
Pm004415 Prunus mume Pm004415 I 0.896
MDP0000378412 Malus domestica MDP0000378412 I 0.854
MDP0000322567 Malus domestica MDP0000322567 I 0.854
gene12120-v1.0-hybrid Fragaria vesca gene12120-v1.0-hybrid I 0.851
MDP0000255146 Malus domestica MDP0000255146 I 0.833
MDP0000259294 Malus domestica MDP0000259294 I 0.833
Eucgr.F00420 Eucalyptus grandis Eucgr.F00420 I 0.833
SapurV1A.0004s1140 Salix purpurea SapurV1A.0004s1140 I 0.812
POPTR_0002s10570 Populus trichocarpa POPTR_0002s10570 I 0.812
MDP0000527190 Malus domestica MDP0000527190 I 0.812
Aquca_015_00177 Aquilegia coerulea Aquca_015_00177 I 0.792
Carubv10005653m.g Capsella rubella Carubv10005653m.g I 0.792
cassava31071.valid.m1 Manihot esculenta cassava31071.valid.m1 I 0.792
Cagra.2171s0007 Capsella grandiflora Cagra.2171s0007 I 0.792
TCM_034501 Theobroma cacao TCM_034501 I 0.792
AGL24 Vitis vinifera VIT_18s0001g07460 I 0.792
Cla022499 Citrullus lanatus Cla022499 I 0.792
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I 0.792
cassava31070.valid.m1 Manihot esculenta cassava31070.valid.m1 I 0.792
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I 0.792
Gorai.002G142700 Gossypium raimondii Gorai.002G142700 I 0.792
Gorai.010G035000 Gossypium raimondii Gorai.010G035000 I 0.792
MDP0000277582 Malus domestica MDP0000277582 N 0.792
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I 0.792
Bra013812 Brassica rapa Bra013812 I 0.771
PGSC0003DMG400016203 Solanum tuberosum PGSC0003DMG400016203 I 0.771
Bra019221 Brassica rapa Bra019221 I 0.771
PGSC0003DMG400009363 Solanum tuberosum PGSC0003DMG400009363 I 0.771
Cla014322 Citrullus lanatus Cla014322 I 0.771
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.771
AGL24 Arabidopsis thaliana AT4G24540 I 0.771
Solyc11g010570.1 Solanum lycopersicum Solyc11g010570.1 I 0.771
orange1.1g040972m.g Citrus sinensis orange1.1g040972m.g I 0.771
Bo1g039080 Brassica oleracea Bo1g039080 I 0.771
Bo7g109590 Brassica oleracea Bo7g109590 I 0.771
orange1.1g027190m.g Citrus sinensis orange1.1g027190m.g I 0.771
AGL24 Arabidopsis lyrata fgenesh2_kg.7__1822__AT4G24540.1 I 0.771
Cucsa.104010 Cucumis sativus Cucsa.104010 I 0.771
Cucsa.160640 Cucumis sativus Cucsa.160640 I 0.771
gene03748-v1.0-hybrid Fragaria vesca gene03748-v1.0-hybrid I 0.771
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I 0.771
MDP0000143531 Malus domestica MDP0000143531 N 0.771
gene05180-v1.0-hybrid Fragaria vesca gene05180-v1.0-hybrid I 0.771
gene03714-v1.0-hybrid Fragaria vesca gene03714-v1.0-hybrid I 0.766
Solyc01g087990.2 Solanum lycopersicum Solyc01g087990.2 I 0.750
TCM_007378 Theobroma cacao TCM_007378 I 0.750
TCM_000992 Theobroma cacao TCM_000992 I 0.750
LjT38P01.180.nd Lotus japonicus LjT38P01.180.nd I 0.750
Thhalv10026757m.g Eutrema salsugineum Thhalv10026757m.g I 0.750
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I 0.750
MDP0000233948 Malus domestica MDP0000233948 I 0.750
MDP0000311107 Malus domestica MDP0000311107 N 0.750
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I 0.750
mgf015964m Mimulus guttatus mgf015964m I 0.750
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I 0.750
Bostr.7867s0261 Boechera stricta Bostr.7867s0261 I 0.750
Ca_12416 Cicer arietinum Ca_12416 I 0.750
GLYMA01G02880 Glycine max GLYMA01G02880 I 0.750
GLYMA04G10015 Glycine max GLYMA04G10015 I 0.750
MTR_5g066180 Medicago truncatula MTR_5g066180 I 0.750
PRUPE_ppa022274mg Prunus persica PRUPE_ppa022274mg I 0.750
GLYMA06G10020 Glycine max GLYMA06G10020 I 0.750
SVP Arabidopsis thaliana AT2G22540 D 0.750
Eucgr.F02141 Eucalyptus grandis Eucgr.F02141 I 0.729
MTR_5g032520 Medicago truncatula MTR_5g032520 I 0.729
evm.TU.supercontig_55.31 Carica papaya evm.TU.supercontig_55.31 I 0.729
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I 0.729
MTR_5g032150 Medicago truncatula MTR_5g032150 I 0.729
Ciclev10029776m.g Citrus clementina Ciclev10029776m.g I 0.729
Si037358m.g Setaria italica Si037358m.g I 0.729
OGLUM03G06330 Oryza glumaepatula OGLUM03G06330 I 0.729
fgenesh1_pg.scaffold_118000119 Physcomitrella patens fgenesh1_pg.scaffold_118000119 I 0.729
Bostr.19427s0024 Boechera stricta Bostr.19427s0024 I 0.729
Cagra.1080s0011 Capsella grandiflora Cagra.1080s0011 I 0.729
OBART03G06320 Oryza barthii OBART03G06320 I 0.729
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I 0.729
GRMZM2G059102 Zea mays GRMZM2G059102 I 0.729
SVP Arabidopsis lyrata fgenesh2_kg.4__174__AT2G22540.1 I 0.729
SapurV1A.1777s0020 Salix purpurea SapurV1A.1777s0020 I 0.729
Bra038511 Brassica rapa Bra038511 I 0.729
Bo8g101000 Brassica oleracea Bo8g101000 I 0.729
Pavir.Ia04527 Panicum virgatum Pavir.Ia04527 I 0.729
BGIOSGA011317 Oryza indica BGIOSGA011317 I 0.729
GLYMA02G04710 Glycine max GLYMA02G04710 I 0.729
GLYMA02G33040 Glycine max GLYMA02G33040 I 0.729
Lus10035942.g Linum usitatissimum Lus10035942.g I 0.729
Lus10025719.g Linum usitatissimum Lus10025719.g I 0.729
e_gw1.55.13.1 Physcomitrella patens e_gw1.55.13.1 I 0.729
MDP0000209705 Malus domestica MDP0000209705 I 0.729
Thhalv10000308m.g Eutrema salsugineum Thhalv10000308m.g I 0.729
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I 0.729
Carubv10023941m.g Capsella rubella Carubv10023941m.g I 0.729
ORGLA03G0061100 Oryza glaberrima ORGLA03G0061100 I 0.729
ORUFI03G06210 Oryza rufipogon ORUFI03G06210 I 0.729
29838.m001690 Ricinus communis 29838.m001690 I 0.729
OPUNC03G06100 Oryza punctata OPUNC03G06100 I 0.729
SVP Vitis vinifera VIT_00s0313g00070 I 0.729
POPTR_0007s03290 Populus trichocarpa POPTR_0007s03290 I 0.729
OS03G0186600 Oryza sativa OS03G0186600 I 0.729
PGSC0003DMG401006771 Solanum tuberosum PGSC0003DMG401006771 I 0.729
Pm002166 Prunus mume Pm002166 I 0.729
Ca_21060 Cicer arietinum Ca_21060 I 0.729
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I 0.729
POPTR_0007s14300 Populus trichocarpa POPTR_0007s14300 I 0.729
Pm022002 Prunus mume Pm022002 I 0.729
ONIVA02G06550 Oryza nivara ONIVA02G06550 I 0.729
Sb01g044810 Sorghum bicolor Sb01g044810 I 0.729
OMERI03G06190 Oryza meridionalis OMERI03G06190 I 0.729
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I 0.729
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I 0.708
Ca_01491 Cicer arietinum Ca_01491 I 0.708
Sb03g041860 Sorghum bicolor Sb03g041860 I 0.708
Ca_19854 Cicer arietinum Ca_19854 I 0.708
MDP0000144516 Malus domestica MDP0000144516 I 0.708
PK20651.1 Cannabis sativa PK20651.1 I 0.708
ANR1 Arabidopsis thaliana AT2G14210 I 0.708
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I 0.708
Bo4g149800 Brassica oleracea Bo4g149800 I 0.708
MDP0000135652 Malus domestica MDP0000135652 I 0.708
BGIOSGA000377 Oryza indica BGIOSGA000377 I 0.708
VIT_03s0017g00360 Vitis vinifera VIT_03s0017g00360 I 0.708
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.708
Pavir.Ib00555 Panicum virgatum Pavir.Ib00555 I 0.708
Bra030228 Brassica rapa Bra030228 I 0.708
Bra008802 Brassica rapa Bra008802 I 0.708
VIT_15s0107g00120 Vitis vinifera VIT_15s0107g00120 I 0.708
Gorai.008G092300 Gossypium raimondii Gorai.008G092300 I 0.708
OBART01G39540 Oryza barthii OBART01G39540 I 0.708
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.708
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.708
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.708
OB01G48280 Oryza brachyantha OB01G48280 I 0.708
OPUNC01G38250 Oryza punctata OPUNC01G38250 I 0.708
OGLUM01G43760 Oryza glumaepatula OGLUM01G43760 I 0.708
OLONG_003010 Oryza longistaminata OLONG_003010 I 0.708
mgf018870m Mimulus guttatus mgf018870m I 0.708
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.708
ONIVA01G44390 Oryza nivara ONIVA01G44390 I 0.708
Eucgr.F02145 Eucalyptus grandis Eucgr.F02145 I 0.708
ORGLA01G0334300 Oryza glaberrima ORGLA01G0334300 I 0.708
OMERI01G36400 Oryza meridionalis OMERI01G36400 I 0.708
Gorai.008G017200 Gossypium raimondii Gorai.008G017200 I 0.708
GLYMA15G06302 Glycine max GLYMA15G06302 I 0.708
Gorai.013G055700 Gossypium raimondii Gorai.013G055700 I 0.708
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I 0.708
MADS2 Oryza sativa OS01G0883100 D 0.708
ORUFI05G05970 Oryza rufipogon ORUFI05G05970 I 0.708
MTR_1g053070 Medicago truncatula MTR_1g053070 I 0.708
LPERR03G05670 Leersia perrieri LPERR03G05670 I 0.708
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I 0.708
LPERR01G34040 Leersia perrieri LPERR01G34040 I 0.708
MDP0000132226 Malus domestica MDP0000132226 N 0.708