Carubv10005368m.g (Capsella rubella)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Carubv10005368m.g T261455_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10005368m MBD 146 220
Carubv10005410m MBD 146 220

Links

Other MBD family TFs
Other Capsella rubella TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.2178s0009 Capsella grandiflora Cagra.2178s0009 N 0.959
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.795
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.787
MBD2 Arabidopsis thaliana AT5G35330 N 0.773
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.767
Bo8g030620 Brassica oleracea Bo8g030620 N 0.740
Bra038936 Brassica rapa Bra038936 N 0.740
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.718
Pm008965 Prunus mume Pm008965 N 0.708
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.708
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.704