MBD02 (Arabidopsis lyrata)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 scaffold_703403.1 T260933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_703403.1 MBD 124 200

Links

Other MBD family TFs
Other Arabidopsis lyrata TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MBD2 Arabidopsis thaliana AT5G35330 N 0.973
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.933
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.877
Bra038936 Brassica rapa Bra038936 N 0.867
Bo8g030620 Brassica oleracea Bo8g030620 N 0.867
Cagra.2178s0009 Capsella grandiflora Cagra.2178s0009 N 0.836
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.803
Carubv10005368m.g Capsella rubella Carubv10005368m.g N 0.787
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.787
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.778
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.764
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.760
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.750
mgf002635m Mimulus guttatus mgf002635m N 0.747
Pm008965 Prunus mume Pm008965 N 0.747
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.747
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.747
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.747
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.747
TCM_039691 Theobroma cacao TCM_039691 N 0.747
Ca_15553 Cicer arietinum Ca_15553 N 0.736
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N 0.733
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.733
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.733
Ca_15552 Cicer arietinum Ca_15552 N 0.733
29843.m000288 Ricinus communis 29843.m000288 N 0.720
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.720
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.708
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.707
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.707