Eucgr.C00067 (Eucalyptus grandis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Eucgr.C00067 T261481_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00067.1 MBD 178 251
Eucgr.C00067.2 MBD 178 258

Links

Other MBD family TFs
Other Eucalyptus grandis TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.901
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.891
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.875
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.875
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.861
TCM_039691 Theobroma cacao TCM_039691 N 0.861
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.861
Ca_15552 Cicer arietinum Ca_15552 N 0.861
mgf002635m Mimulus guttatus mgf002635m N 0.847
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.845
Ca_15553 Cicer arietinum Ca_15553 N 0.833
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.833
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.833
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.819
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.819
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.819
29843.m000288 Ricinus communis 29843.m000288 N 0.817
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.806
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.806
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.792
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.792
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.792
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.786
chr2.CM0373.530.nc Lotus japonicus chr2.CM0373.530.nc N 0.778
Cla005887 Citrullus lanatus Cla005887 N 0.778
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.778
Pm008965 Prunus mume Pm008965 N 0.778
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.767
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.760
MBD2 Arabidopsis thaliana AT5G35330 N 0.760
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.750
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.750
GSMUA_Achr1G23690_001 Musa acuminata GSMUA_Achr1G23690_001 N 0.737
Bo8g030620 Brassica oleracea Bo8g030620 N 0.736
Bra038936 Brassica rapa Bra038936 N 0.736
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.736
Cucsa.209330 Cucumis sativus Cucsa.209330 N 0.729
MDP0000222923 Malus domestica MDP0000222923 N 0.708