Thhalv10003457m.g (Eutrema salsugineum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Thhalv10003457m.g T261631_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10003457m MBD 155 229
Thhalv10003458m MBD 148 222
Thhalv10003463m MBD 155 229

Links

Other MBD family TFs
Other Eutrema salsugineum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.932
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.877
MBD2 Arabidopsis thaliana AT5G35330 N 0.863
Bra038936 Brassica rapa Bra038936 N 0.808
Bo8g030620 Brassica oleracea Bo8g030620 N 0.808
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.803
Pm008965 Prunus mume Pm008965 N 0.795
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.795
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.792
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.781
Cagra.2178s0009 Capsella grandiflora Cagra.2178s0009 N 0.781
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.781
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.778
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.767
Carubv10005368m.g Capsella rubella Carubv10005368m.g N 0.767
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.767
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.753
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.753
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.753
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.753
TCM_039691 Theobroma cacao TCM_039691 N 0.753
Ca_15553 Cicer arietinum Ca_15553 N 0.750
mgf002635m Mimulus guttatus mgf002635m N 0.740
Ca_15552 Cicer arietinum Ca_15552 N 0.740
MDP0000222923 Malus domestica MDP0000222923 N 0.740
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.726
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.726
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.712
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.712