Lus10021593.g (Linum usitatissimum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Lus10021593.g T261541_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10021593 MBD 173 245

Links

Other MBD family TFs
Other Linum usitatissimum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.944
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.803
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.792
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.792
Pm008965 Prunus mume Pm008965 N 0.792
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.778
Cla005887 Citrullus lanatus Cla005887 N 0.778
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.764
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.761
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.750
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.750
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.750
MDP0000222923 Malus domestica MDP0000222923 N 0.750
Ca_15553 Cicer arietinum Ca_15553 N 0.750
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.750
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.750
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.750
Ca_15552 Cicer arietinum Ca_15552 N 0.750
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.750
29843.m000288 Ricinus communis 29843.m000288 N 0.746
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.739
TCM_039691 Theobroma cacao TCM_039691 N 0.736
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.736
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.726
BRADI1G34320 Brachypodium distachyon BRADI1G34320 N 0.722
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.722
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.722
mgf002635m Mimulus guttatus mgf002635m N 0.722
AMTR_s00025p00196500 Amborella trichopoda AMTR_s00025p00196500 N 0.722
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.708
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.708