Gorai.009G001500 (Gossypium raimondii)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Gorai.009G001500 T261520_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G001500.1 MBD 175 249
Gorai.009G001500.2 MBD 175 249
Gorai.009G001500.3 MBD 175 249
Gorai.009G001500.4 MBD 175 249
Gorai.009G001500.5 MBD 174 249
Gorai.009G001500.6 MBD 174 219
Gorai.009G001500.7 MBD 175 249
Gorai.009G001500.8 MBD 175 249

Links

Other MBD family TFs
Other Gossypium raimondii TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf002635m Mimulus guttatus mgf002635m N 0.913
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.891
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.891
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.891
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.870
Ca_15552 Cicer arietinum Ca_15552 N 0.870
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.870
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.870
29843.m000288 Ricinus communis 29843.m000288 N 0.848
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.848
GSMUA_Achr1G23690_001 Musa acuminata GSMUA_Achr1G23690_001 N 0.848
Cucsa.209330 Cucumis sativus Cucsa.209330 N 0.847
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.826
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.826
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.826
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.804
Cla005887 Citrullus lanatus Cla005887 N 0.804
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.804
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.804
MDP0000222923 Malus domestica MDP0000222923 N 0.783
Pm008965 Prunus mume Pm008965 N 0.761
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.761
TCM_039691 Theobroma cacao TCM_039691 N 0.750
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.739
GRMZM2G168269 Zea mays GRMZM2G168269 N 0.717
Pavir.J30425 Panicum virgatum Pavir.J30425 N 0.717
MTR_3g435450 Medicago truncatula MTR_3g435450 N 0.717
Si030613m.g Setaria italica Si030613m.g N 0.717
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.717
GRMZM2G025095 Zea mays GRMZM2G025095 N 0.717
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.708
Pavir.Db00235 Panicum virgatum Pavir.Db00235 N 0.700