AtMYB82 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Al_scaffold_0008_1642 T266121_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.669 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0008_1642 Myb 14 61
Al_scaffold_0008_1642 Myb 67 112

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0084s0008 Capsella grandiflora Cagra.0084s0008 I 0.888
Carubv10028642m.g Capsella rubella Carubv10028642m.g I 0.888
MYB82 Arabidopsis thaliana AT5G52600 I 0.888
Bostr.7305s0011 Boechera stricta Bostr.7305s0011 I 0.883
Bo2g047590 Brassica oleracea Bo2g047590 I 0.869
Thhalv10014754m.g Eutrema salsugineum Thhalv10014754m.g I 0.861
Bo3g023140 Brassica oleracea Bo3g023140 I 0.860
Bra029113 Brassica rapa Bra029113 I 0.860
Bra022602 Brassica rapa Bra022602 I 0.858
Eucgr.C01374 Eucalyptus grandis Eucgr.C01374 I 0.857
Gorai.001G044000 Gossypium raimondii Gorai.001G044000 I 0.836
MDP0000264051 Malus domestica MDP0000264051 I 0.828
evm.TU.supercontig_46.32 Carica papaya evm.TU.supercontig_46.32 I 0.827
TCM_038131 Theobroma cacao TCM_038131 I 0.825
gene31098-v1.0-hybrid Fragaria vesca gene31098-v1.0-hybrid I 0.825
Pm027586 Prunus mume Pm027586 I 0.825
cassava32672.m1 Manihot esculenta cassava32672.m1 I 0.817
Cla016951 Citrullus lanatus Cla016951 I 0.814
PRUPE_ppa016532mg Prunus persica PRUPE_ppa016532mg I 0.814
Gorai.004G276500 Gossypium raimondii Gorai.004G276500 N 0.811
PK01088.1 Cannabis sativa PK01088.1 I 0.811
PGSC0003DMG400030913 Solanum tuberosum PGSC0003DMG400030913 I 0.809
Solyc07g008010.2 Solanum lycopersicum Solyc07g008010.2 I 0.809
MDP0000167314 Malus domestica MDP0000167314 I 0.807
Cucsa.132300 Cucumis sativus Cucsa.132300 N 0.790
POPTR_0018s12780 Populus trichocarpa POPTR_0018s12780 N 0.785
POPTR_0006s06530 Populus trichocarpa POPTR_0006s06530 N 0.774
SapurV1A.0197s0090 Salix purpurea SapurV1A.0197s0090 N 0.762
SapurV1A.2191s0020 Salix purpurea SapurV1A.2191s0020 N 0.762
SapurV1A.0034s0330 Salix purpurea SapurV1A.0034s0330 N 0.761
mgf023205m Mimulus guttatus mgf023205m I 0.759
VIT_11s0016g05660 Vitis vinifera VIT_11s0016g05660 N 0.729
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.721
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.717
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.709
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.704
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.703
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.697
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.692
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I 0.690
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.689
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.687
Pm029489 Prunus mume Pm029489 I 0.687
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.685
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.684
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.684
Ca_01329 Cicer arietinum Ca_01329 I 0.683
SELMODRAFT_127220 Selaginella moellendorffii SELMODRAFT_127220 I 0.683
SELMODRAFT_98669 Selaginella moellendorffii SELMODRAFT_98669 I 0.683
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.682
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.682
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.678
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.678
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.678
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.678
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.678
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.678
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.676
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.676
TCM_037377 Theobroma cacao TCM_037377 I 0.676
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.675
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.675
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.675
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.673
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.673
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.672
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.672
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.671
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.671
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.670
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.669
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.669
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.669
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.668
VIT_11s0016g05690 Vitis vinifera VIT_11s0016g05690 N 0.666
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.666
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.665
Bra039395 Brassica rapa Bra039395 I 0.664
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.664
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.664
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.664
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.663
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.663
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.663
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.662
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.662
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.662
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.662
TT2 Arabidopsis thaliana AT5G35550 I 0.662
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.662
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.662
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.662
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.662
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.662
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.661
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.661
Bo1g138250 Brassica oleracea Bo1g138250 I 0.661
e_gw1.61.201.1 Physcomitrella patens e_gw1.61.201.1 I 0.661