CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.132300
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.132300
T284429_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.132300.1
Myb
13
60
KNLWKPEEDLILRSYVETHGEGNWAIVSQESGLMRGAKSCRLRWKNYL
Cucsa.132300.1
Myb
66
111
RGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla016951
Citrullus lanatus
Cla016951
I
0.886
Gorai.001G044000
Gossypium raimondii
Gorai.001G044000
I
0.859
TCM_038131
Theobroma cacao
TCM_038131
I
0.848
evm.TU.supercontig_46.32
Carica papaya
evm.TU.supercontig_46.32
I
0.842
Eucgr.C01374
Eucalyptus grandis
Eucgr.C01374
I
0.842
Pm027586
Prunus mume
Pm027586
I
0.840
cassava32672.m1
Manihot esculenta
cassava32672.m1
I
0.837
PK01088.1
Cannabis sativa
PK01088.1
I
0.835
MDP0000264051
Malus domestica
MDP0000264051
I
0.834
gene31098-v1.0-hybrid
Fragaria vesca
gene31098-v1.0-hybrid
I
0.830
Bo2g047590
Brassica oleracea
Bo2g047590
I
0.830
PRUPE_ppa016532mg
Prunus persica
PRUPE_ppa016532mg
I
0.829
POPTR_0018s12780
Populus trichocarpa
POPTR_0018s12780
N
0.821
Bra022602
Brassica rapa
Bra022602
I
0.819
Thhalv10014754m.g
Eutrema salsugineum
Thhalv10014754m.g
I
0.816
Gorai.004G276500
Gossypium raimondii
Gorai.004G276500
N
0.816
MDP0000167314
Malus domestica
MDP0000167314
I
0.816
Carubv10028642m.g
Capsella rubella
Carubv10028642m.g
I
0.811
Cagra.0084s0008
Capsella grandiflora
Cagra.0084s0008
I
0.811
MYB82
Arabidopsis thaliana
AT5G52600
I
0.811
Bostr.7305s0011
Boechera stricta
Bostr.7305s0011
I
0.806
POPTR_0006s06530
Populus trichocarpa
POPTR_0006s06530
N
0.800
SapurV1A.0034s0330
Salix purpurea
SapurV1A.0034s0330
N
0.797
AtMYB82
Arabidopsis lyrata
Al_scaffold_0008_1642
I
0.790
Bo3g023140
Brassica oleracea
Bo3g023140
I
0.779
Bra029113
Brassica rapa
Bra029113
I
0.779
mgf023205m
Mimulus guttatus
mgf023205m
I
0.777
SapurV1A.0197s0090
Salix purpurea
SapurV1A.0197s0090
N
0.768
SapurV1A.2191s0020
Salix purpurea
SapurV1A.2191s0020
N
0.768
Solyc07g008010.2
Solanum lycopersicum
Solyc07g008010.2
I
0.765
PGSC0003DMG400030913
Solanum tuberosum
PGSC0003DMG400030913
I
0.765
VIT_11s0016g05660
Vitis vinifera
VIT_11s0016g05660
N
0.746
VIT_11s0016g05690
Vitis vinifera
VIT_11s0016g05690
N
0.710
cassava29820.valid.m1
Manihot esculenta
cassava29820.valid.m1
I
0.691
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.690
SapurV1A.0710s0050
Salix purpurea
SapurV1A.0710s0050
I
0.678
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.676
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.676
Eucgr.J02816
Eucalyptus grandis
Eucgr.J02816
I
0.675
Eucgr.B00866
Eucalyptus grandis
Eucgr.B00866
I
0.672
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.672
GLYMA19G44660
Glycine max
GLYMA19G44660
I
0.671
GLYMA20G32510
Glycine max
GLYMA20G32510
I
0.669
PDK_20s1918041g001
Phoenix dactylifera
PDK_20s1918041g001
I
0.665
POPTR_0018s05530
Populus trichocarpa
POPTR_0018s05530
I
0.665