Bra009910 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra009910 T267821_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009910.1-P Myb 11 35
Bra009910.1-P Myb 41 86

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB86 Arabidopsis thaliana AT5G26660 I 0.864
Traes_3DL_75F8A05CF Triticum aestivum Traes_3DL_75F8A05CF N 0.787
SapurV1A.1387s0090 Salix purpurea SapurV1A.1387s0090 I 0.787
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.772
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.770
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I 0.770
TT2 Arabidopsis thaliana AT5G35550 I 0.766
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.762
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.762
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.761
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.758
F775_32151 Aegilops tauschii F775_32151 N 0.756
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.755
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.753
BGIOSGA027658 Oryza indica BGIOSGA027658 N 0.753
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N 0.749
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.747
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.744
Bo5g131980 Brassica oleracea Bo5g131980 N 0.744
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.744
MDP0000475808 Malus domestica MDP0000475808 N 0.743
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.742
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.742
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.739
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.735
TCM_005371 Theobroma cacao TCM_005371 I 0.734
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.734
F775_22650 Aegilops tauschii F775_22650 N 0.734
PDK_20s1316381g001 Phoenix dactylifera PDK_20s1316381g001 N 0.733
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.728
TRIUR3_12300 Triticum urartu TRIUR3_12300 N 0.728
mgf021749m Mimulus guttatus mgf021749m N 0.728
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.727
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.727
MDP0000153773 Malus domestica MDP0000153773 N 0.725
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.724
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.723
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N 0.723
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.723
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.723
OBART12G16130 Oryza barthii OBART12G16130 N 0.723
PDK_20s1933711g001 Phoenix dactylifera PDK_20s1933711g001 N 0.722
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.721
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.719
PDK_20s1354851g002 Phoenix dactylifera PDK_20s1354851g002 N 0.719
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.719
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N 0.718
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N 0.718
PDK_20s1528141g001 Phoenix dactylifera PDK_20s1528141g001 N 0.718
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N 0.718
WER Arabidopsis thaliana AT5G14750 D 0.718
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.716
Cagra.1317s0038 Capsella grandiflora Cagra.1317s0038 N 0.715
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N 0.715
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N 0.715
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.715
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.715
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.715
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.715
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.715
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.715
MYB59 Arabidopsis thaliana AT5G59780 D 0.715
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.715
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.715
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.714
mgf001247m Mimulus guttatus mgf001247m N 0.714
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N 0.714
TRIUR3_32110 Triticum urartu TRIUR3_32110 N 0.714
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.714
TCM_021433 Theobroma cacao TCM_021433 I 0.714
MYB27 Arabidopsis thaliana AT3G53200 D 0.713
PDK_20s1308492g002 Phoenix dactylifera PDK_20s1308492g002 N 0.713
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.712
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.710
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.710
PK27824.1 Cannabis sativa PK27824.1 N 0.710
Ciclev10029019m.g Citrus clementina Ciclev10029019m.g N 0.710
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.710
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.710
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N 0.708
GRMZM2G032180 Zea mays GRMZM2G032180 N 0.707
mgf018110m Mimulus guttatus mgf018110m N 0.706
mgf009707m Mimulus guttatus mgf009707m N 0.705
PDK_20s1415541g003 Phoenix dactylifera PDK_20s1415541g003 N 0.705
30147.m013749 Ricinus communis 30147.m013749 N 0.703
Traes_2DL_304E62CCE Triticum aestivum Traes_2DL_304E62CCE N 0.703
Si003873m.g Setaria italica Si003873m.g N 0.702
MDP0000169874 Malus domestica MDP0000169874 N 0.699
MDP0000139931 Malus domestica MDP0000139931 N 0.699
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N 0.699
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.699
Pavir.J23620 Panicum virgatum Pavir.J23620 N 0.699
BGIOSGA013008 Oryza indica BGIOSGA013008 N 0.698
mgf026560m Mimulus guttatus mgf026560m N 0.697
OS01G0975300 Oryza sativa OS01G0975300 N 0.697
MYB24 Arabidopsis thaliana AT5G40350 D 0.696
MYB21 Arabidopsis thaliana AT3G27810 I 0.696
Traes_2DS_EEE59C2E7 Triticum aestivum Traes_2DS_EEE59C2E7 N 0.693
BGIOSGA002307 Oryza indica BGIOSGA002307 N 0.690
LjSGA_148662.1 Lotus japonicus LjSGA_148662.1 N 0.689
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I 0.687
Cagra.2519s0060 Capsella grandiflora Cagra.2519s0060 N 0.686
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.684
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N 0.684
Bo2g011790 Brassica oleracea Bo2g011790 N 0.684
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.682
ORGLA01G0040600 Oryza glaberrima ORGLA01G0040600 N 0.682
Bra031041 Brassica rapa Bra031041 N 0.681
MDP0000470422 Malus domestica MDP0000470422 N 0.678
evm.TU.supercontig_87.85 Carica papaya evm.TU.supercontig_87.85 N 0.678
mgf026463m Mimulus guttatus mgf026463m N 0.677
TCM_032927 Theobroma cacao TCM_032927 I 0.675
MDP0000244980 Malus domestica MDP0000244980 N 0.673
TRIUR3_33813 Triticum urartu TRIUR3_33813 N 0.673
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.672
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.671
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.671
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.671
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.671
Pm029438 Prunus mume Pm029438 N 0.668
TCM_013983 Theobroma cacao TCM_013983 I 0.668
MDP0000242612 Malus domestica MDP0000242612 N 0.668
Cagra.1655s0054 Capsella grandiflora Cagra.1655s0054 N 0.665
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.665
MYB114 Arabidopsis thaliana AT1G66380 I 0.665
Al_scaffold_0002_1204 Arabidopsis lyrata Al_scaffold_0002_1204 N 0.665
Traes_2AL_E8C400686 Triticum aestivum Traes_2AL_E8C400686 N 0.663
PDK_20s1338951g004 Phoenix dactylifera PDK_20s1338951g004 N 0.662
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N 0.662
LjSGA_032074.1 Lotus japonicus LjSGA_032074.1 N 0.661