Cagra.1317s0038 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.1317s0038 T286027_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1317s0038.1.p Myb 16 36
Cagra.1317s0038.1.p Myb 42 87

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB59 Arabidopsis thaliana AT5G59780 D 0.909
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.909
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N 0.903
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N 0.891
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.891
PK27824.1 Cannabis sativa PK27824.1 N 0.890
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.886
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.886
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.886
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.875
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.874
Ciclev10029019m.g Citrus clementina Ciclev10029019m.g N 0.866
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.866
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.860
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.857
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.851
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.851
OBART12G16130 Oryza barthii OBART12G16130 N 0.837
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N 0.837
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N 0.837
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.837
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N 0.837
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.837
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N 0.837
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N 0.831
mgf009707m Mimulus guttatus mgf009707m N 0.830
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N 0.814
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.810
Bo3g017760 Brassica oleracea Bo3g017760 N 0.795
mgf001247m Mimulus guttatus mgf001247m N 0.794
MYB24 Arabidopsis thaliana AT5G40350 D 0.789
MYB21 Arabidopsis thaliana AT3G27810 I 0.789
OS01G0975300 Oryza sativa OS01G0975300 N 0.789
Si003873m.g Setaria italica Si003873m.g N 0.782
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.780
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.778
Pavir.J23620 Panicum virgatum Pavir.J23620 N 0.773
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N 0.772
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N 0.770
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.767
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.767
MYB27 Arabidopsis thaliana AT3G53200 D 0.765
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.764
F775_22650 Aegilops tauschii F775_22650 N 0.758
MDP0000139931 Malus domestica MDP0000139931 N 0.758
MDP0000169874 Malus domestica MDP0000169874 N 0.758
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.752
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.751
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.751
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.749
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.749
PDK_20s1528141g001 Phoenix dactylifera PDK_20s1528141g001 N 0.749
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.747
TCM_021433 Theobroma cacao TCM_021433 I 0.747
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.747
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.745
evm.TU.supercontig_87.85 Carica papaya evm.TU.supercontig_87.85 N 0.743
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.742
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.742
MYB86 Arabidopsis thaliana AT5G26660 I 0.741
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.740
TRIUR3_32110 Triticum urartu TRIUR3_32110 N 0.740
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.740
BGIOSGA013008 Oryza indica BGIOSGA013008 N 0.740
MDP0000475808 Malus domestica MDP0000475808 N 0.739
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.738
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.737
TCM_005371 Theobroma cacao TCM_005371 I 0.735
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.734
BGIOSGA027658 Oryza indica BGIOSGA027658 N 0.732
mgf018110m Mimulus guttatus mgf018110m N 0.730
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.727
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.727
mgf021749m Mimulus guttatus mgf021749m N 0.725
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.723
TT2 Arabidopsis thaliana AT5G35550 I 0.722
TRIUR3_12300 Triticum urartu TRIUR3_12300 N 0.722
PDK_20s1354851g002 Phoenix dactylifera PDK_20s1354851g002 N 0.721
WER Arabidopsis thaliana AT5G14750 D 0.720
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.720
30147.m013749 Ricinus communis 30147.m013749 N 0.720
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.719
Cagra.2519s0060 Capsella grandiflora Cagra.2519s0060 N 0.719
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.719
Bra009910 Brassica rapa Bra009910 N 0.715
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.713
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.712
SapurV1A.1387s0090 Salix purpurea SapurV1A.1387s0090 I 0.710
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I 0.709
MDP0000153773 Malus domestica MDP0000153773 N 0.709
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N 0.703
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.702
MYB114 Arabidopsis thaliana AT1G66380 I 0.702
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.702
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.700
Bo5g131980 Brassica oleracea Bo5g131980 N 0.700
Traes_3DL_75F8A05CF Triticum aestivum Traes_3DL_75F8A05CF N 0.700
GRMZM2G032180 Zea mays GRMZM2G032180 N 0.698
BGIOSGA002307 Oryza indica BGIOSGA002307 N 0.697
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.696
LjSGA_148662.1 Lotus japonicus LjSGA_148662.1 N 0.693
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.691
Traes_2DL_304E62CCE Triticum aestivum Traes_2DL_304E62CCE N 0.689
VIT_02s0033g00460 Vitis vinifera VIT_02s0033g00460 N 0.689
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.689
mgf026560m Mimulus guttatus mgf026560m N 0.688
Bra031041 Brassica rapa Bra031041 N 0.688
PDK_20s1933711g001 Phoenix dactylifera PDK_20s1933711g001 N 0.680
F775_32151 Aegilops tauschii F775_32151 N 0.680
Bo2g011790 Brassica oleracea Bo2g011790 N 0.676
Al_scaffold_0002_1204 Arabidopsis lyrata Al_scaffold_0002_1204 N 0.675
PDK_20s1316381g001 Phoenix dactylifera PDK_20s1316381g001 N 0.674
Traes_2AL_E8C400686 Triticum aestivum Traes_2AL_E8C400686 N 0.674
Pm029438 Prunus mume Pm029438 N 0.674
Cagra.1655s0054 Capsella grandiflora Cagra.1655s0054 N 0.673
TRIUR3_33813 Triticum urartu TRIUR3_33813 N 0.672
LjSGA_032074.1 Lotus japonicus LjSGA_032074.1 N 0.671
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N 0.671
OLONG_004747 Oryza longistaminata OLONG_004747 N 0.670
PDK_20s1338951g004 Phoenix dactylifera PDK_20s1338951g004 N 0.668
MDP0000242612 Malus domestica MDP0000242612 N 0.668
MYB94 Arabidopsis thaliana AT3G47600 D 0.667
TCM_032927 Theobroma cacao TCM_032927 I 0.666
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.666
Traes_2DS_EEE59C2E7 Triticum aestivum Traes_2DS_EEE59C2E7 N 0.666
MDP0000244980 Malus domestica MDP0000244980 N 0.664
MDP0000470422 Malus domestica MDP0000470422 N 0.664
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I 0.664
mgf026463m Mimulus guttatus mgf026463m N 0.664
Traes_5AL_D1807A4E0 Triticum aestivum Traes_5AL_D1807A4E0 N 0.663
PGSC0003DMG400013172 Solanum tuberosum PGSC0003DMG400013172 N 0.663
ORGLA01G0040600 Oryza glaberrima ORGLA01G0040600 N 0.662
Pavir.J19088 Panicum virgatum Pavir.J19088 N 0.661