PK27824.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK27824.1 T290487_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK27824.1 Myb 97 116
PK27824.1 Myb 122 167

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.891
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.891
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.891
Cagra.1317s0038 Capsella grandiflora Cagra.1317s0038 N 0.890
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.890
MYB59 Arabidopsis thaliana AT5G59780 D 0.890
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N 0.886
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.886
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N 0.884
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.873
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.871
Ciclev10029019m.g Citrus clementina Ciclev10029019m.g N 0.871
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.870
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.869
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.862
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.846
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.846
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N 0.842
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N 0.842
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N 0.842
mgf009707m Mimulus guttatus mgf009707m N 0.840
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N 0.833
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.833
OBART12G16130 Oryza barthii OBART12G16130 N 0.833
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.833
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N 0.831
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N 0.814
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.806
Bo3g017760 Brassica oleracea Bo3g017760 N 0.795
mgf001247m Mimulus guttatus mgf001247m N 0.794
MYB21 Arabidopsis thaliana AT3G27810 I 0.789
OS01G0975300 Oryza sativa OS01G0975300 N 0.789
MYB24 Arabidopsis thaliana AT5G40350 D 0.789
Si003873m.g Setaria italica Si003873m.g N 0.787
Pavir.J23620 Panicum virgatum Pavir.J23620 N 0.783
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.776
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.774
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.772
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.772
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N 0.770
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.769
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.765
MDP0000169874 Malus domestica MDP0000169874 N 0.763
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N 0.763
MDP0000139931 Malus domestica MDP0000139931 N 0.763
PDK_20s1528141g001 Phoenix dactylifera PDK_20s1528141g001 N 0.759
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.756
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.754
F775_22650 Aegilops tauschii F775_22650 N 0.753
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.752
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.752
TCM_021433 Theobroma cacao TCM_021433 I 0.752
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.752
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.751
MYB27 Arabidopsis thaliana AT3G53200 D 0.751
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.749
evm.TU.supercontig_87.85 Carica papaya evm.TU.supercontig_87.85 N 0.748
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.747
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.747
BGIOSGA013008 Oryza indica BGIOSGA013008 N 0.745
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.745
MDP0000475808 Malus domestica MDP0000475808 N 0.744
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.740
TRIUR3_32110 Triticum urartu TRIUR3_32110 N 0.740
BGIOSGA027658 Oryza indica BGIOSGA027658 N 0.737
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.736
MYB86 Arabidopsis thaliana AT5G26660 I 0.736
mgf018110m Mimulus guttatus mgf018110m N 0.735
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.733
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.732
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.732
mgf021749m Mimulus guttatus mgf021749m N 0.730
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.730
TCM_005371 Theobroma cacao TCM_005371 I 0.730
PDK_20s1354851g002 Phoenix dactylifera PDK_20s1354851g002 N 0.726
TRIUR3_12300 Triticum urartu TRIUR3_12300 N 0.722
30147.m013749 Ricinus communis 30147.m013749 N 0.720
WER Arabidopsis thaliana AT5G14750 D 0.720
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.720
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.719
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.719
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.718
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.717
TT2 Arabidopsis thaliana AT5G35550 I 0.717
MYB114 Arabidopsis thaliana AT1G66380 I 0.716
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.716
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I 0.714
Cagra.2519s0060 Capsella grandiflora Cagra.2519s0060 N 0.714
MDP0000153773 Malus domestica MDP0000153773 N 0.714
Bra009910 Brassica rapa Bra009910 N 0.710
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.710
SapurV1A.1387s0090 Salix purpurea SapurV1A.1387s0090 I 0.710
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N 0.708
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.705
Traes_3DL_75F8A05CF Triticum aestivum Traes_3DL_75F8A05CF N 0.705
Bo5g131980 Brassica oleracea Bo5g131980 N 0.705
BGIOSGA002307 Oryza indica BGIOSGA002307 N 0.702
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.702
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.701
GRMZM2G032180 Zea mays GRMZM2G032180 N 0.698
Traes_2DL_304E62CCE Triticum aestivum Traes_2DL_304E62CCE N 0.694
LjSGA_148662.1 Lotus japonicus LjSGA_148662.1 N 0.693
Bra031041 Brassica rapa Bra031041 N 0.693
mgf026560m Mimulus guttatus mgf026560m N 0.688
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.686
F775_32151 Aegilops tauschii F775_32151 N 0.685
PDK_20s1933711g001 Phoenix dactylifera PDK_20s1933711g001 N 0.685
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.684
Bo2g011790 Brassica oleracea Bo2g011790 N 0.681
Al_scaffold_0002_1204 Arabidopsis lyrata Al_scaffold_0002_1204 N 0.680
VIT_02s0033g00460 Vitis vinifera VIT_02s0033g00460 N 0.680
Traes_2AL_E8C400686 Triticum aestivum Traes_2AL_E8C400686 N 0.679
Pm029438 Prunus mume Pm029438 N 0.679
Cagra.1655s0054 Capsella grandiflora Cagra.1655s0054 N 0.678
MDP0000242612 Malus domestica MDP0000242612 N 0.678
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N 0.676
LjSGA_032074.1 Lotus japonicus LjSGA_032074.1 N 0.676
OLONG_004747 Oryza longistaminata OLONG_004747 N 0.675
PDK_20s1316381g001 Phoenix dactylifera PDK_20s1316381g001 N 0.674
PDK_20s1338951g004 Phoenix dactylifera PDK_20s1338951g004 N 0.673
TRIUR3_33813 Triticum urartu TRIUR3_33813 N 0.672
MYB94 Arabidopsis thaliana AT3G47600 D 0.672
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.671
Traes_2DS_EEE59C2E7 Triticum aestivum Traes_2DS_EEE59C2E7 N 0.671
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I 0.669
mgf026463m Mimulus guttatus mgf026463m N 0.669
MDP0000244980 Malus domestica MDP0000244980 N 0.669
PGSC0003DMG400013172 Solanum tuberosum PGSC0003DMG400013172 N 0.668
TCM_032927 Theobroma cacao TCM_032927 I 0.666
Pavir.J19088 Panicum virgatum Pavir.J19088 N 0.666
MDP0000470422 Malus domestica MDP0000470422 N 0.664
Traes_5AL_D1807A4E0 Triticum aestivum Traes_5AL_D1807A4E0 N 0.663
ORGLA01G0040600 Oryza glaberrima ORGLA01G0040600 N 0.662
PDK_20s1415541g003 Phoenix dactylifera PDK_20s1415541g003 N 0.661