L798_03377 (Zootermopsis nevadensis)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 L798_03377 T318663_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rfx7
M00823_2.00 		Mus musculus
GTYRCYRNSB
VSNYRGYRAC		 PBM
Weirauch et al.(2013)
pTH3516 		0.700 0.570
Rfx7
M00187_2.00 		Mus musculus
BGTHDYYRNN
NNYRRHDACV		 PBM
Badis et al.(2009)
Rfxdc2_3516 		0.700 0.570
RFX7
M05729_2.00 		Homo sapiens
BGTTRCYRY
RYRGYAACV		 SELEX
Yin et al.(2017)
RFX7_eDBD_HT-SELEX 		0.700 0.570
RFX7
M05730_2.00 		Homo sapiens
BGTTGCYRB
VYRGCAACV		 SELEX
Yin et al.(2017)
RFX7_eDBD_Methyl-HT-SELEX 		0.700 0.570
RFX5
M03458_2.00 		Homo sapiens
BGTTRCYATRGYAACV
BGTTRCYATRGYAACV		 SELEX
Jolma et al.(2013)
RFX5_1 		0.687 0.494
RFX5
M03459_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_2 		0.687 0.494
RFX5
M03460_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_3 		0.687 0.494
RFX5
M05725_2.00 		Homo sapiens
BGTTRCYANGBGTTGCYRN
NYRGCAACVCNTRGYAACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_1 		0.687 0.494
RFX5
M05726_2.00 		Homo sapiens
NYRVYAACSGTTRCYAN
NTRGYAACSGTTRBYRN		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_2 		0.687 0.494
RFX5
M08009_2.00 		Homo sapiens
KCRBYDGTTRCYRRG
CYYRGYAACHRVYGM		 ChIP-seq
Gerstein et al.(2012)
GM12878_RFX5_Stanford 		0.687 0.494
RFX5
M08010_2.00 		Homo sapiens
DBVBYDGTTGCYRGGBVRR
YYBVCCYRGCAACHRVBVH		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RFX5_Stanford 		0.687 0.494
RFX5
M08011_2.00 		Homo sapiens
TCVBYDGTTDCYRDG
CHYRGHAACHRVBGA		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_RFX5_Stanford 		0.687 0.494
RFX5
M08012_2.00 		Homo sapiens
YDGTTRCYRKGBVRV
BYBVCMYRGYAACHR		 ChIP-seq
Gerstein et al.(2012)
HepG2_RFX5_Stanford 		0.687 0.494
RFX5
M09364_2.00 		Homo sapiens
VNNVBYDGTTGCYRKGNVRV
BYBNCMYRGCAACHRVBNNB		 Misc
Kulakovskiy et al.(2013)
RFX5_HUMAN.H11MO.0.A 		0.687 0.494
RFX5
M09629_2.00 		Homo sapiens
NDGTTRCYADGV
BCHTRGYAACHN		 Misc
Heinz et al.(2010)
GM12878-Rfx5_GSE31477 		0.687 0.494
RFX5
M11249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_03 		0.687 0.494
RFX5
M11250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_05 		0.687 0.494
RFX5
M05727_2.00 		Homo sapiens
BGTYRYYRNGBGTTGYYRN
NYRRCAACVCNYRRYRACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_1 		0.687 0.494
RFX5
M05728_2.00 		Homo sapiens
NTRGYAASSGTYRBYRN
NYRVYRACSSTTRCYAN		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_2 		0.687 0.494
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR06952 RFX 170 248

Links

Other RFX family TFs
Other Zootermopsis nevadensis TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hsal_12778--XP_001120516.1_APIME Harpegnathos saltator Hsal_12778--XP_001120516.1_APIME I 0.766
ACEP24602 Atta cephalotes ACEP24602 I 0.766
SINV24627 Solenopsis invicta SINV24627 I 0.766
GB49419 Apis mellifera GB49419 I 0.766
NV23037 Nasonia vitripennis NV23037 I 0.763
MCINX003210 Melitaea cinxia MCINX003210 I 0.757
HMEL011744 Heliconius melpomene HMEL011744 I 0.757
KGM_16732 Danaus plexippus KGM_16732 I 0.754
PHUM035280 Pediculus humanus PHUM035280 I 0.751
CLEC011984 Cimex lectularius CLEC011984 I 0.748
DAPPUDRAFT_64123 Daphnia pulex DAPPUDRAFT_64123 I 0.747
BGIBMGA007758 Bombyx mori BGIBMGA007758 I 0.744
TC008959 Tribolium castaneum TC008959 I 0.744
MDOA009335 Musca domestica MDOA009335 I 0.743
LDEC011897 Leptinotarsa decemlineata LDEC011897 I 0.743
LCUP014592 Lucilia cuprina LCUP014592 I 0.742
GM10553 Drosophila sechellia FBgn0165499 I 0.742
CG9727 Drosophila melanogaster FBgn0037445 I 0.742
GE24099 Drosophila yakuba FBgn0241238 I 0.742
GD19544 Drosophila simulans FBgn0191039 I 0.742
GL22063 Drosophila persimilis FBgn0159655 I 0.742
GA21990 Drosophila pseudoobscura FBgn0081975 I 0.742
GK13786 Drosophila willistoni FBgn0215794 I 0.742
GH18082 Drosophila grimshawi FBgn0125550 I 0.742
GJ22650 Drosophila virilis FBgn0209754 I 0.742
GI24583 Drosophila mojavensis FBgn0147305 I 0.742
GG10435 Drosophila erecta FBgn0102744 I 0.742
GF16654 Drosophila ananassae FBgn0093675 I 0.741
AFAF011654 Anopheles farauti AFAF011654 I 0.738
AMEC002251 Anopheles melas AMEC002251 I 0.738
AFUN011072 Anopheles funestus AFUN011072 I 0.738
ADIR010232 Anopheles dirus ADIR010232 I 0.738
ACHR008891 Anopheles christyi ACHR008891 I 0.738
AALB008384 Anopheles albimanus AALB008384 I 0.738
AARA004226 Anopheles arabiensis AARA004226 I 0.738
AATE016751 Anopheles atroparvus AATE016751 I 0.738
ACOM036649 Anopheles coluzzii ACOM036649 I 0.738
ACUA017169 Anopheles culicifacies ACUA017169 I 0.738
AEPI006624 Anopheles epiroticus AEPI006624 I 0.738
AMIN003942 Anopheles minimus AMIN003942 I 0.738
AMEM009524 Anopheles merus AMEM009524 I 0.738
ASIS020285 Anopheles sinensis ASIS020285 I 0.738
ADAC008404 Anopheles darlingi ADAC008404 I 0.738
ASTEI04100 Anopheles stephensi ASTEI04100 I 0.738
AGAP013226 Anopheles gambiae AGAP013226 I 0.738
AQUA006870 Anopheles quadriannulatus AQUA006870 I 0.738
CPIJ006094 Culex quinquefasciatus CPIJ006094 I 0.736
CpipJ_CPIJ006094 Culex pipiens CpipJ_CPIJ006094 I 0.736
AAEL013752 Aedes aegypti AAEL013752 I 0.734
Cflo_11342--XP_001120516.1_APIME Camponotus floridanus Cflo_11342--XP_001120516.1_APIME I 0.730
tetur02g00620 Tetranychus urticae tetur02g00620 I 0.723
HmN_000672900 Hymenolepis microstoma HmN_000672900 I 0.714
HDID_0000095701 Hymenolepis diminuta HDID_0000095701 I 0.714
HNAJ_0001122601 Hymenolepis nana HNAJ_0001122601 I 0.711
A_01977 Schistosoma haematobium A_01977 I 0.711
Smp_040350 Schistosoma mansoni Smp_040350 I 0.711
TsM_000553100 Taenia solium TsM_000553100 I 0.709
TTAC_0000027401 Hydatigera taeniaeformis TTAC_0000027401 I 0.709
SPU_027998 Strongylocentrotus purpuratus SPU_027998 I 0.709
EmuJ_001055400 Echinococcus multilocularis EmuJ_001055400 I 0.709
ECANG7_06078 Echinococcus canadensis ECANG7_06078 I 0.709
ENSPMAG00000005066 Petromyzon marinus ENSPMAG00000005066 I 0.706
Ocbimv22017482m.g Octopus bimaculoides Ocbimv22017482m.g I 0.705
rfx7 Danio rerio ENSDARG00000077237 I 0.704
T265_11740 Opisthorchis viverrini T265_11740 I 0.703
csin102559 Clonorchis sinensis csin102559 I 0.703
RFX7 Felis catus ENSFCAG00000029408 I 0.703
Sjc_0019090 Schistosoma japonicum Sjc_0019090 I 0.702
ISCW001129 Ixodes scapularis ISCW001129 I 0.702
SROB_0001335501 Schistosoma rodhaini SROB_0001335501 I 0.702
RFX7 Oryzias latipes ENSORLG00000005342 I 0.701
RFX7 Danio rerio ENSDARG00000103691 I 0.701
ENSAMXG00000014807 Astyanax mexicanus ENSAMXG00000014807 I 0.701
ENSXMAG00000006676 Xiphophorus maculatus ENSXMAG00000006676 I 0.701
ENSGMOG00000004164 Gadus morhua ENSGMOG00000004164 I 0.701
ENSONIG00000008334 Oreochromis niloticus ENSONIG00000008334 I 0.701
RFX7 Gasterosteus aculeatus ENSGACG00000006090 I 0.701
ENSLOCG00000013505 Lepisosteus oculatus ENSLOCG00000013505 I 0.701
ENSPANG00000017297 Papio anubis ENSPANG00000017297 I 0.700
ENSPPYG00000006502 Pongo abelii ENSPPYG00000006502 I 0.700
Rfx7 Rattus norvegicus ENSRNOG00000060367 I 0.700
RFX7 Pan troglodytes ENSPTRG00000007104 I 0.700
RFX7 Pteropus vampyrus ENSPVAG00000005381 I 0.700
ENSPSIG00000014731 Pelodiscus sinensis ENSPSIG00000014731 I 0.700
ENSSHAG00000003875 Sarcophilus harrisii ENSSHAG00000003875 I 0.700
RFX7 Vicugna pacos ENSVPAG00000012402 I 0.700
ENSTSYG00000002441 Tarsius syrichta ENSTSYG00000002441 I 0.700
RFX7 Procavia capensis ENSPCAG00000004974 I 0.700
ENSLACG00000015878 Latimeria chalumnae ENSLACG00000015878 I 0.700
RFX7 Choloepus hoffmanni ENSCHOG00000003451 I 0.700
ENSCPOG00000005366 Cavia porcellus ENSCPOG00000005366 I 0.700
ENSCSAG00000011819 Chlorocebus sabaeus ENSCSAG00000011819 I 0.700
RFX7 Oryctolagus cuniculus ENSOCUG00000013678 I 0.700
RFX7 Canis familiaris ENSCAFG00000016029 I 0.700
RFX7 Bos taurus ENSBTAG00000000565 I 0.700
RFX7 Anolis carolinensis ENSACAG00000008482 I 0.700
ENSAMEG00000018368 Ailuropoda melanoleuca ENSAMEG00000018368 I 0.700
ENSAMXG00000020093 Astyanax mexicanus ENSAMXG00000020093 I 0.700
ENSAPLG00000005911 Anas platyrhynchos ENSAPLG00000005911 I 0.700
RFX7 Homo sapiens ENSG00000181827 D 0.700
ENSFALG00000012087 Ficedula albicollis ENSFALG00000012087 I 0.700
Rfx7 Mus musculus ENSMUSG00000037674 D 0.700
ENSNLEG00000006658 Nomascus leucogenys ENSNLEG00000006658 I 0.700
RFX7 Ornithorhynchus anatinus ENSOANG00000008526 I 0.700
RFX7 Monodelphis domestica ENSMODG00000008136 I 0.700
ENSMPUG00000002204 Mustela putorius furo ENSMPUG00000002204 I 0.700
rfx7 Xenopus tropicalis XB-GENE-1008447 I 0.700
RFX7 Loxodonta africana ENSLAFG00000018745 I 0.700
RFX7 Meleagris gallopavo ENSMGAG00000005745 I 0.700
RFX7 Dasypus novemcinctus ENSDNOG00000044983 I 0.699
RFX7 Tursiops truncatus ENSTTRG00000010051 I 0.697
rfx7 Gasterosteus aculeatus ENSGACG00000015838 I 0.697
RFX7 Tetraodon nigroviridis ENSTNIG00000013706 I 0.696
RFX7 Takifugu rubripes ENSTRUG00000008008 I 0.696
RFX7 Macaca mulatta ENSMMUG00000017801 I 0.696
Myotis_brandtii_RFX7_10006263 Myotis brandtii Myotis_brandtii_RFX7_10006263 I 0.696
RFX7 Otolemur garnettii ENSOGAG00000031795 I 0.696
ENSP00000397644-D1 Bos grunniens ENSP00000397644-D1 I 0.696
ENSOARG00000020885 Ovis aries ENSOARG00000020885 I 0.696
RFX7 Myotis lucifugus ENSMLUG00000028676 I 0.696
ENSGMOG00000002477 Gadus morhua ENSGMOG00000002477 I 0.696
SMU15027042 Schmidtea mediterranea SMU15027042 I 0.696
ENSMMUP00000033587 Macaca fascicularis ENSMMUP00000033587 I 0.696
Gfo_R004305 Geospiza fortis Gfo_R004305 I 0.696
RFX7 Sorex araneus ENSSARG00000010801 I 0.696
Afo_R011605 Aptenodytes forsteri Afo_R011605 I 0.696
RFX7 Taeniopygia guttata ENSTGUG00000006356 I 0.696
Aan_R011989 Calypte anna Aan_R011989 I 0.696
RFX7 Equus caballus ENSECAG00000002379 I 0.695
NEMVEDRAFT_v1g25228 Nematostella vectensis NEMVEDRAFT_v1g25228 I 0.695
e_gw.237.152.1 Branchiostoma floridae e_gw.237.152.1 I 0.694
LotgiG138119 Lottia gigantea LotgiG138119 I 0.694
Pvit_17399 Pogona vitticeps Pvit_17399 I 0.690
RFX7 Erinaceus europaeus ENSEEUG00000013718 I 0.690
Alligator_sinensis_CCG008945.1 Alligator sinensis Alligator_sinensis_CCG008945.1 I 0.689
Brh_R008414 Buceros rhinoceros Brh_R008414 I 0.689
rfx7 Tetraodon nigroviridis ENSTNIG00000009322 I 0.689
ENSONIG00000005780 Oreochromis niloticus ENSONIG00000005780 I 0.688
rfx7 Oryzias latipes ENSORLG00000008583 I 0.688
ENSMPUG00000003735 Mustela putorius furo ENSMPUG00000003735 I 0.687
ENSNLEG00000010170 Nomascus leucogenys ENSNLEG00000010170 I 0.687
ENSMMUG00000013172 Macaca mulatta ENSMMUG00000013172 I 0.687
RFX5 Myotis lucifugus ENSMLUG00000015218 I 0.687
ENSOARG00000020987 Ovis aries ENSOARG00000020987 I 0.687
RFX5 Otolemur garnettii ENSOGAG00000008120 I 0.687
ENSP00000389130-D1 Bos grunniens ENSP00000389130-D1 I 0.687
ENSP00000389130 Macaca fascicularis ENSP00000389130 I 0.687
Myotis_brandtii_RFX5_10008035 Myotis brandtii Myotis_brandtii_RFX5_10008035 I 0.687
RFX5 Loxodonta africana ENSLAFG00000030906 I 0.687
ENSOCUG00000011564 Oryctolagus cuniculus ENSOCUG00000011564 I 0.687
RFX5 Gorilla gorilla ENSGGOG00000016795 I 0.687
RFX5 Callithrix jacchus ENSCJAG00000007482 I 0.687
ENSCPOG00000010643 Cavia porcellus ENSCPOG00000010643 I 0.687
RFX5 Canis familiaris ENSCAFG00000012661 I 0.687
RFX5 Bos taurus ENSBTAG00000017580 I 0.687
ENSAMEG00000000695 Ailuropoda melanoleuca ENSAMEG00000000695 I 0.687
ENSCSAG00000001799 Chlorocebus sabaeus ENSCSAG00000001799 I 0.687
ENSDORG00000015967 Dipodomys ordii ENSDORG00000015967 I 0.687
RFX5 Homo sapiens ENSG00000143390 D 0.687
RFX5 Felis catus ENSFCAG00000005568 I 0.687
RFX5 Echinops telfairi ENSETEG00000013503 I 0.687
RFX5 Equus caballus ENSECAG00000024774 I 0.687
ENSPANG00000005712 Papio anubis ENSPANG00000005712 I 0.687
Rfx5 Mus musculus ENSMUSG00000005774 I 0.687
RFX5 Sorex araneus ENSSARG00000000750 I 0.687
ENSSTOG00000013246 Ictidomys tridecemlineatus ENSSTOG00000013246 I 0.687
RFX5 Pan troglodytes ENSPTRG00000001286 I 0.687
RFX5 Pteropus vampyrus ENSPVAG00000011680 I 0.687
Rfx5 Rattus norvegicus ENSRNOG00000021012 I 0.687
RFX5 Tupaia belangeri ENSTBEG00000006419 I 0.687
RFX5 Tursiops truncatus ENSTTRG00000007023 I 0.687
ENSPPYG00000000867 Pongo abelii ENSPPYG00000000867 I 0.687
ENSXMAG00000003651 Xiphophorus maculatus ENSXMAG00000003651 I 0.687
RFX5 Sus scrofa ENSSSCG00000006625 I 0.687
RFX7 Echinops telfairi ENSETEG00000015037 I 0.686
ENSPFOG00000002938 Poecilia formosa ENSPFOG00000002938 I 0.686
Gfo_R003263 Geospiza fortis Gfo_R003263 I 0.686
ENSFALG00000010929 Ficedula albicollis ENSFALG00000010929 I 0.686
ENSMEUG00000011101 Macropus eugenii ENSMEUG00000011101 I 0.685
ENSSHAG00000014366 Sarcophilus harrisii ENSSHAG00000014366 I 0.685
rfx7 Takifugu rubripes ENSTRUG00000017897 I 0.685
ENSACAG00000029645 Anolis carolinensis ENSACAG00000029645 I 0.685
XP_002167798.1 Hydra magnipapillata XP_002167798.1 I 0.684
RFX5 Procavia capensis ENSPCAG00000011056 I 0.684
CGI_10006904 Crassostrea gigas CGI_10006904 I 0.684
RFX5 Erinaceus europaeus ENSEEUG00000010785 I 0.684
CapteG131555 Capitella teleta CapteG131555 I 0.683
ENSONIG00000003955 Oreochromis niloticus ENSONIG00000003955 I 0.683
ENSTRUG00000000177 Takifugu rubripes ENSTRUG00000000177 I 0.683
rfx5 Tetraodon nigroviridis ENSTNIG00000005388 I 0.683
RFX5 Choloepus hoffmanni ENSCHOG00000012900 I 0.683
rfx5 Danio rerio ENSDARG00000063258 I 0.682
RFX5 Gallus gallus ENSGALG00000000836 I 0.682
ENSPFOG00000010592 Poecilia formosa ENSPFOG00000010592 I 0.682
ENSXMAG00000017295 Xiphophorus maculatus ENSXMAG00000017295 I 0.682
rfx5 Xenopus tropicalis XB-GENE-5942579 I 0.681
Pvit_04986 Pogona vitticeps Pvit_04986 I 0.681
ENSAMXG00000008359 Astyanax mexicanus ENSAMXG00000008359 I 0.680
ENSLOCG00000008459 Lepisosteus oculatus ENSLOCG00000008459 I 0.680
Afo_R007667 Aptenodytes forsteri Afo_R007667 I 0.680
ENSMGAG00000001126 Meleagris gallopavo ENSMGAG00000001126 I 0.680
ENSORLG00000001269 Oryzias latipes ENSORLG00000001269 I 0.679
Alligator_sinensis_CCG020683.1 Alligator sinensis Alligator_sinensis_CCG020683.1 I 0.676
Aan_R010941 Calypte anna Aan_R010941 I 0.675
Ogr13052 Ophisaurus gracilis Ogr13052 I 0.673
rfx5.S Xenopus laevis XB-GENE-6079297 I 0.672
ENSPSIG00000018073 Pelodiscus sinensis ENSPSIG00000018073 I 0.670
AQUA006869 Anopheles quadriannulatus AQUA006869 N 0.668
LLOJ009233 Lutzomyia longipalpis LLOJ009233 N 0.668
MESCA005939 Megaselia scalaris MESCA005939 N 0.668
MESCA006788 Megaselia scalaris MESCA006788 N 0.661
scaffold324-EXSNAP2012.23 Pristionchus exspectatus scaffold324-EXSNAP2012.23 I 0.657
BGIBMGA012712 Bombyx mori BGIBMGA012712 I 0.657
MhA1_Contig1476.frz3.gene5 Meloidogyne hapla MhA1_Contig1476.frz3.gene5 I 0.655
SMU15015144 Schmidtea mediterranea SMU15015144 I 0.654
Ogr11408 Ophisaurus gracilis Ogr11408 I 0.653
CGI_10016120 Crassostrea gigas CGI_10016120 I 0.653
BXY_1592600 Bursaphelenchus xylophilus BXY_1592600 I 0.653
KGM_13721 Danaus plexippus KGM_13721 I 0.653
PTSG_10225 Salpingoeca rosetta PTSG_10225 I 0.653
SCUD_0001838101 Schistosoma curassoni SCUD_0001838101 I 0.652
SPU_002235 Strongylocentrotus purpuratus SPU_002235 I 0.652
D915_00887 Fasciola hepatica D915_00887 I 0.652
ACYPI002124 Acyrthosiphon pisum ACYPI002124 I 0.651
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.651
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.651
maker-nMf.1.1.scaf03280-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03280-augustus-gene-0.7 I 0.651
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.651
ECPE_0001841201 Echinostoma caproni ECPE_0001841201 I 0.650
HelroG82191 Helobdella robusta HelroG82191 I 0.650